Aptenodytes forsteri (emperor penguin): 103899777
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Entry
103899777 CDS
T08527
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103899777 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afor03032
]
103899777 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
afor03400
]
103899777 (TOPBP1)
DNA replication proteins [BR:
afor03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
103899777 (TOPBP1)
DNA repair and recombination proteins [BR:
afor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103899777 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
103899777
NCBI-ProteinID:
XP_009278580
LinkDB
All DBs
Position
Unknown
AA seq
1518 aa
AA seq
DB search
MKGSKEPFFVKFIKSSGNSEYFFKALESIKEFQSEEHLQILEEETALNIKENDKSLYICD
PFRGIVFSHLKKLGCRIVGPQVVLYCMQSQRCVPRAEYPVYNMTMADVTVSCTSLEKDVR
EEVHKYVQMMGGRVCRDLNVSVTHLIAGEVGSKKYLVAASLKKPILLPSWVKTLWDKSQQ
SIMRYTDVHMEDYACPVFLGCIICVTGLSSSDRKEVQRLTAEHGGQYTGQLKMNECTHLI
VQEPKGQKYECAKKWNVHCVSVQWFSDSIEKGFCQDETIYKIEAGSEPSNTPSTSTPTNH
ASKSDNHILSDVSHISSINLSGVNETACSSAMSSRLDPVPDELENLDISSFQAPEDLLDG
CRIYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHVILGENNDELKHFLDKTAHRPHV
VTAKWLLESFSKGYLHPVEQYIPLNYQLLENPILERPGMKSILPKNNSLLKKEAVNVIKH
QKAAEDDFLSLYVNNDSTSDEVEKLTSRTFNNVTHLTVQGEDQPSVCNGSLGESSALVEG
GLFVRKRFLLFGFGEEDESCIADIIKENAGKILPLQSRTIADYAVVPLLGCTVKPTVGDV
VTNTWLITCVEQQLLLDPQSNPLFTPVPVMEGVTPLEDCVLSFSQFTGAERDSLVYLAGL
LGARVQEFFVRKANAKKGMFASTHLVVREPDGSKYEAAKKWNLPAVSVAWLLQSARTGKR
ADESKFLVENAEAEDKESSITQLSKTPATVKSDSEQPTYLLEAGKKTAVTPLDINRFQSK
AFQAVISHHIGKKTTPLAQGGLPQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETP
VGPDQKTRKLSTPLSEVIGRNLKLALANSTRHTVALTASPQLTTAQPEVEEEPKPLADVV
ICVSKKLSKKQSELNAVAASLGADYRWCFDETVTHFIYKGGQNDNNKEYKSVKERGIHIV
SEHWLLESAQEYKRLPESLFPHTYNPKMSLDISAVQDVRLSSSKLPSTAKPVEENEIIPV
DEDDAEDDVTTDQIKEIVTTGEEQIVTSESKGVLTQALEMRENFQRQLQEIMSATSLVKP
QGQRGSLSRNSFDGSPTTPDSTRSVRNGRSRVLEALRQSRQALTDINTEPSQSEQIIWDD
PTAREERARLVSNFQWPNSPSQYTEHGQSNVYKNMDESAFKGSLADAEIAGIAVPEAGDG
DLIGGLKNPVCRDPETPIKDHLIPTPQAPSIAFPLANPPVAPQPKEKAVTEDEKADEEPE
KHRKFQLSSLNPQERFDYCHLIEELGGIVLEKQCFDPSCTHIVVGHPLRNEKFLASMAAG
KWVLHRSYLEACRGAGCFVQEEDYEWGSNSILNVLPGINVNQKKLALAAMRWRKKIHKGR
QETGIVEGAFSGWKVILNVDQTKEAGFRRLLQSGGAKVFSGHSVSLFKEATHLFADFSKL
KPDDTRVNIAEAAAQGVNCLKPEYIADYLIQDPPPPMESYCLPEAESYLQNNTELGTGVS
QKRKALGEMSRVKRSRIH
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtagtaaggaaccattttttgtgaaattcataaagtcttctgggaactcggag
tatttttttaaagctcttgagtctataaaagaatttcagtcagaagaacatctccagatc
cttgaagaagaaacagcgctcaatataaaagaaaatgataaatcactctacatttgtgat
ccttttagaggcattgttttcagtcatctcaaaaagcttggttgtagaattgttggacca
caggtagtcctgtactgtatgcagtcccagcgatgtgtcccaagagctgagtatcctgtg
tacaatatgaccatggccgatgtaacagtatcctgtaccagccttgaaaaagatgttagg
gaagaagttcataaatatgtgcagatgatgggtggacgtgtgtgcagagacctcaatgtg
tcagtaactcatcttatagctggagaagttggcagcaagaaatacttagtagctgcttct
ctgaaaaaacctattttgcttccctcttgggttaagacactgtgggataaatctcagcaa
agcataatgagatacactgatgttcacatggaagactacgcttgtcccgtgttccttggc
tgtataatttgtgtaactggcttaagtagttcagacaggaaagaagtccagcgcctcact
gctgaacatggtgggcaatatacagggcagctcaagatgaatgaatgtactcacctcata
gttcaagagccaaaaggtcagaagtatgaatgtgccaaaaaatggaacgtgcactgtgtg
tctgtgcagtggttttctgacagcattgagaaaggcttctgtcaggatgagacaatatat
aaaatagaagctggatcagaaccgagtaatacacccagtacgtcaacacctacaaatcat
gccagcaagtccgataatcatatcctttcggacgtcagccacatttccagtatcaatttg
agtggtgttaatgaaactgcatgtagctctgctatgagcagcagactggatcctgttcct
gatgagctggaaaacttggatataagttcttttcaagcccctgaagatttgttagatggg
tgtcgaatctatctgtgtggcttcagcggcaggaagttggacaagatgaggcggcttatt
aattgcggtggtggtgttcgatttaatcaacttaatgaagatgttacccatgtcattttg
ggggaaaataatgatgagctgaaacactttttggacaagacagctcacaggcctcatgta
gtgacagcaaaatggttgctggagtcatttagtaaaggttatctacatccagtggagcaa
tatatccctttaaactaccagctgttagagaacccaattttggagcgacctggaatgaaa
tcaattcttcccaaaaataacagtctcttgaagaaagaagctgtgaacgttataaagcac
cagaaagctgctgaagatgacttcctctctctatatgtaaataatgattctacatcagat
gaagttgaaaaactaacatccagaaccttcaataatgttactcacttgactgttcaagga
gaggatcaaccttctgtctgtaatggttctttgggagagtcttctgcactggttgaagga
ggcttatttgtcagaaagagatttcttcttttcggttttggtgaagaggacgagtcctgc
attgcagatattataaaggagaacgctgggaaaattctgccgctacaaagcagaaccatt
gcagactatgctgtggtacctttattggggtgcacagtgaagccgactgttggtgatgtt
gtcacaaatacgtggctgataacatgtgtggaacagcagctccttttagatccccagtcc
aatccacttttcacaccagtcccagtaatggaaggagttacccctctggaagattgtgtt
ctttcttttagccagttcactggtgcagagagagactccctggtttatttggcaggactg
ctaggagcaagagtccaagaattctttgtgcggaaagccaatgcaaaaaagggaatgttt
gccagtacccatcttgtagtgagagaaccggatggttcgaagtatgaagctgcgaagaag
tggaatttgccggcagtctctgtagcttggcttttgcagtctgcaaggacaggaaagaga
gcagatgaaagcaagttcttggttgaaaatgcagaggctgaagataaggagagttctatt
actcagcttagcaagacaccagcaactgttaaatctgattcggaacaacctacttacctc
cttgaagctggaaaaaaaacagctgtgacccctcttgatatcaacaggttccagagtaaa
gctttccaagctgtgatctctcatcatattgggaagaagacaacccctcttgcacaaggg
gggctgccacagaaagaaccgtctttacatcttgatacaccatcaaaatttctttccaaa
gacaagttattcaagccttcttttgatgtaaaggatgctctggcagctttggaaactcct
gtgggtcctgatcaaaaaaccaggaaactgagcacacctctctctgaagtcatcggcaga
aacttgaaattggcactggcgaacagcacaaggcatacagtagctcttactgccagccct
cagttgaccactgcacagccagaagtggaagaagagcccaagcctctagctgatgttgtt
atatgtgttagtaaaaaacttagtaagaagcaaagtgaactgaatgcagtagcagcttct
cttggggcagactacagatggtgctttgatgaaacagtaacacacttcatctacaaggga
ggacaaaatgacaataataaggagtacaaatccgttaaagaacggggtatacatattgtt
tcagaacactggcttttagagagtgcccaagagtataaacggcttcctgagtctctcttt
cctcacacttacaatcccaaaatgagcctggacatcagtgcagtgcaagatgtcaggctc
tcctccagtaaacttccatcaactgcaaaaccagtagaggaaaatgagattattccagtg
gatgaagatgatgctgaagatgatgtaactactgatcagataaaggaaatagtcactaca
ggggaagaacaaattgtaacaagtgaatccaaaggagttttaacccaagcactagaaatg
agggagaactttcaaaggcagctgcaggagatcatgtctgccacatcactagtgaaacca
caagggcaaagaggttccctttcaaggaacagttttgatggttctccaaccactcctgat
agcacacggtctgtgcgaaatggccgcagtagggtcttggaagctctaaggcaatcccgt
caggcactcacagatataaatacagagccatcccagagtgagcagatcatctgggacgat
cctactgcgagggaggagagagcaagacttgtcagcaactttcagtggcctaacagtcct
tcccagtacactgagcacggtcagagtaacgtctataagaacatggatgagtctgccttc
aaaggatctttagctgatgcggagattgctggtatagctgttcctgaggctggggatgga
gatttgattggaggtctaaaaaatcctgtatgtagagatcctgaaacaccgattaaagat
cacttgatccccactccgcaggcccccagcattgctttcccactagctaaccctcctgtg
gcaccacagcccaaagaaaaggctgttacagaagatgagaaggctgatgaagaaccagaa
aaacaccgtaaatttcagctgtcttctcttaatcctcaagaaagatttgattactgccat
ctgattgaggaattaggtggaatagtacttgagaaacagtgctttgatccaagttgcacc
cacattgttgtgggacatcctcttcgaaatgaaaaattcttggcttcgatggcagctgga
aagtgggtgcttcatcgttcctacctggaggcatgtagaggagctggctgctttgttcag
gaagaagattatgagtggggaagtaattccatacttaatgttttgcctggaatcaatgta
aaccagaagaaactagcactcgcagccatgaggtggaggaaaaaaattcataaagggagg
caagaaactggtattgttgagggagctttcagtggctggaaagtgatcctgaacgttgac
caaaccaaggaagcaggattcaggcgccttcttcagtcaggaggagcaaaagtgttttct
ggtcattctgtgtctctctttaaagaagcaactcatctcttcgctgacttcagtaagctg
aagccggatgacaccagggttaacatagcagaggcggcagcccaaggagtgaactgcctg
aaaccggagtacattgctgactacctcatccaggacccacctcccccaatggagtcttac
tgcctgccggaagctgagtcttaccttcagaataacacagaacttggaactggagtatcc
cagaaaagaaaagcgctgggagaaatgagcagagtcaagcgatctagaatacactga
DBGET
integrated database retrieval system
