Aptenodytes forsteri (emperor penguin): 103899943
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Entry
103899943 CDS
T08527
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor04512
ECM-receptor interaction
afor04514
Cell adhesion molecule (CAM) interaction
afor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103899943 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
103899943 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103899943 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afor04131
]
103899943 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
afor04090
]
103899943 (SDC1)
00535 Proteoglycans [BR:
afor00535
]
103899943 (SDC1)
Membrane trafficking [BR:
afor04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
103899943 (SDC1)
CD molecules [BR:
afor04090
]
Proteins
103899943 (SDC1)
Proteoglycans [BR:
afor00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
103899943 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
103899943
NCBI-ProteinID:
XP_019327939
LinkDB
All DBs
Position
Unknown
AA seq
237 aa
AA seq
DB search
MDFSKQPFPGLESQTEKEVVSPSATSNVVTEEPVVAVKDEVPILGSPDEKPANDAVTTVR
SPTTHFPSVVHVTPSEASGTVHELEPKIPSSDVSDTKDVPEPYSTIHHEGDIAATPTPTT
PKDIVPTHEDVSEDGSGDPGDFILTKDEDLVPTQNSEVLADSGRNAKASGASGIMERKEV
LGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQKPHKQEEFYA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagcaaacagccatttcccgggcttgagagccaaactgaaaaggaagtagta
tctccttctgcaactagtaatgtagtgacagaggagccagttgtagctgtgaaggacgaa
gtacccatcctgggctcgcctgatgagaaaccagcaaatgatgcggttacaacagtgaga
agccccactactcactttccttcagtggttcatgtaactccttcagaagcctcaggcaca
gtccatgagcttgaacctaaaatccctagctctgatgtgtcagacactaaagacgtgcct
gagccctactctaccatccatcatgagggagacatcgctgccacccccacaccaacaact
ccaaaggacattgttcctacacatgaggatgtttctgaagatggctctggagacccggga
gacttcatcttgactaaagatgaggatttggtccccacccagaactcagaagtactggct
gactctgggaggaatgccaaagcatcaggagcctcaggaattatggagagaaaagaagtt
cttggaggtgttattgctggaggactagtaggcctggtgtttgcagtgtttctagttgca
tttatgctgtacagaatgaagaaaaaagacgaaggcagctattcactggacgaaccaaaa
cagtctaacggaggataccaaaaaccacacaaacaagaagaattctatgcataa
DBGET
integrated database retrieval system