Aptenodytes forsteri (emperor penguin): 103900166
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Entry
103900166 CDS
T08527
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103900166 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afor03019
]
103900166 (CPSF2)
Messenger RNA biogenesis [BR:
afor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103900166 (CPSF2)
U7-dependent histone pre-mRNA processing factors
103900166 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
103900166
NCBI-ProteinID:
XP_009279062
UniProt:
A0A087R525
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKERLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDLE
MQVDMPSSDSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVLGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattatcaagttgactacgctttcaggggtgcaggaggaatctgccctttgc
tatctgttacaagtagatgaatttcgttttcttttggactgtggctgggatgaaaacttt
tctatggatattattgattctctgaggaaacatgtgcaccaggttgatgctgttcttctt
tctcatcctgaccctctacaccttggtgctcttccatatgcagttggaaaaatggggttg
aattgtgctatttatgcaactattcctgtatataaaatgggacagatgtttatgtatgat
ctctaccagtcccgccataacactgaagatttcacactctttacattggatgatgtagat
gcagcctttgataagatacaacagctgaagttttctcagattgtgaacttgaaaggcaaa
ggacatggtttgtcaattacaccattgccagctggccacatgataggaggcacaatttgg
aagattgtcaaggatggggaggaagaaattgtttacgcagttgatttcaaccacaagagg
gagatccatctgaatggatgttccttggaaatgttgagcaggccttcattgcttattaca
gattcatttaatgctacttatgtacaacccaggaggaagcaaagggatgaacagctactg
actaatgttttggagacattacgaggtgatggaaacgtattaatagccgtggatacagca
ggcagagttctggaacttgctcaacttcttgatcagatctggagaacgaaagatgcagga
ttaggagtctactctctagcactcttgaataacgtcagctacaatgtagtggagttctct
aaatcacaggttgaatggatgagtgacaagttgatgaggtgctttgaagacaagagaaac
aatccttttcagttccgccatctctccttatgtcacagtctgtctgatctggctcgagtg
cctagtccaaaagttgttcttgccagtcaacctgacttagagtgtgggttttccagagat
cttttcattcaatggtgccaggattccaaaaactctataattttaacgtaccgcactaca
cctggaacattagcacgattcctgattgataatccttctgaaaaagttatagatattgag
ttgagaaaacgtgtcaagttggaaggaaaagaacttgaagaatacctagaaaaggagaga
ctgaagaaagaagcagctaagaagttagaacagtctaaagaggcagatatcgattccagt
gatgagagtgatgctgaagaggatattgatcagccaactgtacataagaccaaacacgat
ttgatgatgaaaggtgaaggtagccggaaaggaagtttcttcaaacaggcaaagaaatct
tatcccatgtttccagccccggaagaaagaattaaatgggatgaatatggcgagattatc
aaacctgaggattttctagttccagaacttcaagcaacagaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagaagagcctatggaccaggacttatcagatgttcctacc
aaatgtatttctgcaacagaatctatggaaatcaaagccagagttacatatattgactat
gaaggacgctcagatggggactcaattaaaaaaattattaaccaaatgaaaccacgacag
ctgatcattgtccatggaccgcctgaggccagtcaggaccttgcagaatgttgcagagct
tttggtggaaaagatattaaagtttacatgccaaaactgcatgaaactgtagatgcaacc
agcgaaactcacatttaccaggtcaggttaaaagattctcttgtcagctccctacagttc
tgcaaagccaaggatgccgagttggcctggatagatggtgttctggacatgcgggtttcg
aaagtggatactggagttattttggaagagggagagctgagggaagatgaagacttagag
atgcaagtggatatgccttcttcagactctagtgtcattgcacaacagaaggccatgaaa
agcctcttcggtgacgatgacaaggagatgtgtgaggagagcgagatcattcctactttg
gaacctctgccacctcatgaggttcttggacatcagtctgtgtttatgaatgagccgaga
ctgtctgacttcaagcaagttctcttgcgagaaggtatacaagctgaatttgtaggagga
gtgcttgtgtgcaacaacctggtggctgttcgcaggactgaaacggggcgcattggatta
gaaggctgtctctgtcaggacttctataggataagagaccttttgtacgagcaatacgct
attgtctaa
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integrated database retrieval system
