Aptenodytes forsteri (emperor penguin): 103900704
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Entry
103900704 CDS
T08527
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103900704 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afor03000
]
103900704 (ARID1B)
03021 Transcription machinery [BR:
afor03021
]
103900704 (ARID1B)
03036 Chromosome and associated proteins [BR:
afor03036
]
103900704 (ARID1B)
Transcription factors [BR:
afor03000
]
Eukaryotic type
Helix-turn-helix
ARID
103900704 (ARID1B)
Transcription machinery [BR:
afor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103900704 (ARID1B)
Chromosome and associated proteins [BR:
afor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103900704 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
103900704
NCBI-ProteinID:
XP_009279708
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MDPMVMKRPQLYGMGNNPHSQTQQSSPYPGQSYGPPGPQRYPVGMQGRAPAAMGGMQYPQ
QQIPPQYGQQGVSGYCQQGQQPYYNQQPQPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGT
RSQPPMAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGE
QSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGS
QSESSSHPALSQSPMPQDRGFMAGIQRNPQMSQYGPQQTGPSMSPHPSPGGQVHPGIGSF
QQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPC
GTMPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQ
AAANSAQSRQGNFPAMNQSGIMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSTAPM
GLADMMTPGESKLPLPLKADGKEEGPPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPS
SASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKMWVDRYLT
FMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAA
SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQST
GSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNA
PYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQSPSGAM
SNMSMSQRQQFSYGSGYDRRSDHGLGPEGSMGPPGQSNMVPSNSDPSMYSPNRYPGQQRH
EPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDMYNMQYGNQ
QQEMYNQYSNAYTGPDRRPMQGQYPYPYNRERMQGPGQMQQHGIPPQMIGGPMQSSSSSE
GPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVNQ
RQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPS
MKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAW
RVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGI
LMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKEENDECIDYFDEDEEEGEDEKVEGEEK
SIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFDSGLLHWQL
GGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDLEGKGESEEQQEKSITATIDDVL
SARPGALPEDSNSGSQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSL
AKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEE
DKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSA
EAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGD
RKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMH
MQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICD
VLFQIGQL
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatggtcatgaagagacctcagttgtacggcatgggcaataaccctcactct
cagacgcagcagagcagcccctaccccgggcagtcctacggccctcccggcccccagcgc
tatcccgtgggaatgcagggccgagccccggcagccatgggaggaatgcagtatccacag
caacagataccacctcagtatggtcagcaaggtgtaagtggctactgccagcagggccag
cagccgtactacaaccagcagccgcagcctcagcatctgccaccccaggcacaatatctg
tcgcaggcccagcagaggtaccaggctcagcaggacatgtctcaggaaggctatggaacc
agatctcaacccccgatggcccctggaaagcctaaccatgaagacttgaatctaatccag
caagaaagaccatcaagcttaccagatttatctggatccattgacgacttgccgactgga
accgaagcaaccctgagctcagctgttagcgcgtcaggctctacgagcagccaaggggag
cagagcaaccctgcacagtctccattctcccctcatgcttctccacatctctctggcatc
cccgggggcccatcgccttcccctgtaggctctcccgttggaagcaaccagtcgagatct
ggtcccatttctccagcgagtattccaggcagtcagatgccaccgcagcctcctggcagc
cagtcagaatccagctcccaccctgccttgagccagtcaccaatgccacaggaccgaggt
tttatggcaggcatacagaggaacccccaaatgtcacagtatggacctcagcaaactgga
ccttccatgtcaccacacccctcacctggaggccaagtgcatcctggaatcggtagcttt
cagcagagtaattcaagtggtacttatgggcctcagatgagccagtatggaccacaagga
aactactccagaccaccaacgtacagcggcgtgcccaacacaagttacagtggcccagga
cccggcatgggtataaacgccaacagtcagatgcatggacaggggccaagccagccttgc
ggtaccatgcccctgggacggatgccatcagctgggatgcagagcagaccattccctgga
aacatgagcagtatgacccccaattctcctggcatgtctcagcagggaggccccgggatg
ggcccacccatgccaactgtgaaccgtaaggcacaggaggcggctgctgcagtgatgcag
gctgctgcaaactctgctcagagcaggcaaggcaattttcctgccatgaatcagagcggt
attatgggatccagctccccctacactcagccgatgaacaacagctctggcttgatgaac
ccgcaggctcctccttacagcatggcacctaacatggtgaacagttcaacagcacctatg
ggtcttgcagatatgatgacacccggtgagtccaaactaccccttcctctcaaagcagat
ggcaaagaagaaggacccccccaacccgagagcaagtcaaaggatagctacagctctcag
ggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtccccaagc
tctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagcccaggctgg
ccaaagactccatcaagccctaaatcaagttcctctaccacaactggagagaagatcaca
aaagtctatgaactaggaaacgagccagagcgcaagatgtgggtggatcggtacctcacg
ttcatggaggagaggggcacgcccgtggccagtctgccagctgtgggcaagaagcccctg
gacctgttcaggctctatgtctgcgtcaaagagattggaggtttagcacaggttaataaa
aacaagaagtggcgtgagctggcaaccaccttgaacgttggcacttcgagcagcgcagcc
agctccctgaaaaaacaatacattcagtacctgtttgccttcgagtgcaagattgagcga
ggggaggagccccctccagaagtcttcagcactggagatactaagaaacaacctaagatt
cagccgccatctcctgctaattctggttccttgcaaggcccacagactccacagtctact
ggtagtaattccatgacagaagtgccaggcgatttgaagccccctacaccagcatcaaca
cctcatggacagatgacacctatgcagggtggcagaaacagcgcagttagtgtgcatgat
cccttttctgacgtaagtgattcagcattcccgaagcgaaattccatgacgccaaatgca
ccataccagcagggaataaacatgccagatatgatgggaaggatgccatacgagccgaat
aaagatcctttcggtggaatgagaaaagtgcctggaagcaatgagcctttcatgacccct
ggacaaatgcctaacagtggaatacaagatatgtataaccagagtccatctggagcaatg
tccaacatgagcatgagccagcgacagcagttctcttacggaagtggctatgacaggagg
tcggatcatgggctgggtcctgaaggcagtatgggaccacctggtcaaagcaacatggtg
ccttcaaacagtgacccaagcatgtactctcctaatcgttaccctggccagcaaaggcat
gaaccatacgggcagcagtatccaggacaaggacctccctcaggacagccaccatatgga
ggacatcaacctggaatgtatccacagcagcagaactataagagacacatggatggcatg
tatggccctccagccaaacgccatgaaggggatatgtataacatgcagtatggcaaccag
caacaggaaatgtataaccagtacagcaacgcttacacggggcctgacaggaggcccatg
cagggacagtatccatatccgtataacagggagaggatgcagggcccaggacaaatgcag
cagcatggaatacctccccagatgattggtggccccatgcagtcgtcatcctccagcgaa
ggtcctcagcagaacatgtggccaacacgaaatgatatgccttacccttaccagaatagg
caaggtccaggaggccctgcacaggccccaccgtatccagggatgaatcgcactgatgat
atgatggtacctgaccagaggataaaccacgagagtcagtggccttctcatgtcaaccaa
cgtcagccttcttatatgtcatcctcagcctccatgcagcctatcactagacctcctcag
tcatcctaccagacgccaccctctatgccaaaccacatctctagagctccaagtccagca
tccttccagcgctctttggaaaaccgtatgtctccaagcaagtctcctttcctaccctcc
atgaagatgcaaaaggttatacccacagttccagtgtcacaggtcacaggacctccaccc
caaccaccaccgattaggcgagaaattaccttccccccaggctctgtagaagcatcccaa
ccagtcttaaaaccaagacgaaagattacctcaaaagatattgtaactcctgaggcctgg
agagtgatgatgtctcttaaatctggtcttttggctgaaagtacttgggcgctagacact
attaatattcttctgtatgatgacagcactgtcgctactttcaacctctctcagttgtct
ggatttcttgagcttttagtagaatattttagaaaatgcctgattgacatttttggaatc
cttatggaatatgaagtgggagatccaggccacaaagcacttgatcacaaagcagccaag
aaagatgatagccaatccttggcagaggatactggaaaagaggagaacgacgaatgtatt
gactattttgatgaagatgaggaggagggggaggatgaaaaggtagaaggagaagaaaag
agcattgttttttccactcctggtgccattgctgatccaagtgagaggccaaaacaagcc
agtaaatttgacaagctgccaataaagattgtaaagaaaaataatctatttgttgttgac
cgatctgacaaactcggacgcgttcaggaatttgatagtggacttctccactggcagctt
ggtggtggtgacacaactgagcatatccagactcactttgaaagcaagatggagattcct
ccgcgcaggaaagcccctcctcccttgaactctccaagcaaaaagaaggacctcgagggg
aaaggtgaatctgaggaacaacaagaaaaaagtataacagcaaccattgatgatgtcctc
tcagctcggccgggagcactgcctgaagactcaaactctggttcccaaacagagagcagt
aaatttccttttgggatccatcaagccaaaagccaccggaatattaaactgctagaggat
gagccaaggagccgggatgagactcctctatgcaccataactcactggcaagactccttg
gccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtgcctggcaat
gacaccgaaatgtccaaacatccaggcttggtgctgatcctgggaaagttgatccttctt
caccatgagcatccagaaagaaagcgagcgccgcagacttacgagaaagaggaagaggag
gacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgaggtcttgagg
gataatacattggtcacgttagccaacatttctgggcagctagacttgtctgcttacaca
gaaagcatctgtttgccaattttggatggcttgctgcactggatggtgtgcccgtctgcg
gaggcacaggatccttttccaaccgtggggcccaactcagttctttcgcctcagagactt
gtgctggagaccctgtgtaagctcagtatccaggacaataatgtggaccttatcttggcc
acccccccattcagtcgtcaggagaaactctacgctactttagttaggtacgttggggac
cgcaaaaacccggtctgccgagaaatgtccatggcgctcttatcgaaccttgcccagggg
gacacattagcagcaagggcaatagctgtgcagaagggaagcatcggaaacttgataagc
ttcctggaggatggggtcactatggcccagtaccagcagagccagcataacctcatgcac
atgcagcctccacctctggagccacctagcgtagacatgatgtgcagggcagccaaggcc
ttgctggccatggctagagtggacgagaaccgctcagagttccttttgcacgagggtcgt
ttgctggatatctcaatatctgctgtcctgaactctctggttgcatctgtcatctgtgat
gtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
