Aptenodytes forsteri (emperor penguin): 103901375
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Entry
103901375 CDS
T08527
Symbol
TNC
Name
(RefSeq) tenascin isoform X2
KO
K06252
tenascin
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor04510
Focal adhesion
afor04512
ECM-receptor interaction
afor04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103901375 (TNC)
04518 Integrin signaling
103901375 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103901375 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
afor00536
]
103901375 (TNC)
Glycosaminoglycan binding proteins [BR:
afor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103901375 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
DUF7949
Fn3_VIN3
EGF
Pur_ac_phosph_N
Interfer-bind
NDNF
hEGF
DUF4998
Fn3_R-PTP-O
Motif
Other DBs
NCBI-GeneID:
103901375
NCBI-ProteinID:
XP_009280526
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MGLPTQVLVCAILALLYQQVNGGLIKRIIRQKRETGLNVTLPEDNQPVVFNHVYNIKLPV
GSLCSVDLDTASGDADLKAEIEPIKNYEEHTVNEENQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPNSQAVEGRLDTTPYCSGRGNYSIEICGCICEP
GWKGPNCSEPDCPRNCFNRGLCVQGKCVCNEGFTGEDCSQATCPFDCNDQGKCVDGVCMC
FEGYTGTDCSEELCTQGCSVHGRCMNGQCVCHEGFTGEDCSEPLCPNNCHNRGRCVDNEC
VCNEGYTGEDCSELICPNDCFDRGRCVNGTCFCEEGFTGEDCGELTCPNNCNGNGRCENG
LCVCYEGFVGDDCSEKRCPKDCHNRGRCVGGRCICHEGYLGEDCGELRCPNDCHNRGRCI
NGQCVCHEGFIGEDCGELRCPSDCNNRGRCVNGQCVCHEGFIGDDCGELRCPNDCNNHGL
CVNGQCVCNEGYTGEDCGELRCPNDCNNRGRCVEGRCECDNGFTGEDCGELSCPNDCHQH
GRCIDGRCVCHEGFTGEDCRERSCPNNCNNVGRCIDGRCVCEDGYMGNDCSDVSPPTELT
VTNVTDKTVNLEWKHENLVNEYLITYVPTSSGGLDMQFTVPGNQTAATIHELEPGVEYFI
RVFAILKNKKSIPVSARVATYLPAPEGLKFKSVRETSVQVEWDPLNFSFDGWELVFRNMK
KDDNGDITSSLKRPETSYMQPGLAPGQQYNVSLHIVKNNTRGPGLSRVITTKLDAPSQIE
AKDVTDSTALITWSKPLAEIEGIELTYGPKDVPGDRTTIDLSEDENQYSIGNLRPHTEYE
VTLISRRGDMESDPMKEVFVTDLDAPRNLKRVSQTDNSITLEWKNSHANIDNYRIKFAPI
SGGDHAEITVPKGNQATTRATLTGLRPGTEYGIGVTAVRQDRESAPATINAGTDLDNPKD
LEVSDPTETTLSLRWRRPVAKFDRYRLIYVSPSGRKNEVEIPVDSTSFILRGLEAGTEYT
VSLVAEKGRHKSKPTTVKGSTEEEPELGKLSVSETGWDGFQLTWTAADGAYENFIIQVQE
SDNPEETQNIIVPGGLRFMNVTGLKANTPYNITLHGVIQGYRTKPLSVETMTGVHPEVGE
LTVSDITPESFNLSWTTTNADFDVFTIEIIDSNRLLEPMEFNISGNSRTAHISGLSPSTD
FIVYLYGISHGFRTQAKSAAATTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVLKI
RDTKRKSDPLELIVPGHERTQDITGLKEGTEYEIELYGFSSGRRSQPINAVATTVVGSPK
GISFSDITENSATVSWTPPRTRVESYRISYVPVTGGTPNVVTVDGSKTRTKLVKLVPGVD
YNVSIISVKGFEESEPVSGTLKTALDSPSGLVVVNITDSEALATWQPAIAAVDNYVVSYA
SEDESEVTQMVSGNTVEYDLKGLRPATEYTLSVHALKDTQKSETLSTQFTTGLDAPRDLS
ATEVQSETAVITWRPPRAPVTDYLLIYESIDGRVKEVILNPETTSYSLTELSPSTQYTVK
LQALNRSLKSKTIQTIFTTTGLLYPYPKDCSQALLNGETTSGLYTVYLNGEKAQPLQVFC
DMGEDGGGWIVFLRRQNGKEDFYKNWKTYVAGFGDPKDEFWIGLENLHKITSQGQYELRV
DLRDKGEAAYAVYDRFNVGDAKSRYRLRVDGYSGTAGDSMTYHNGRSFSTFDKDNDSAIT
NCALSYKGAFWYKNCHRVNLMGRYGDNSHSQGVNWFHWKGHEYSIQFAEMKLRPSSFRNL
EGRRKRA
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgggactccccacccaggttttggtctgtgcgatcttagctttgctgtaccagcaagtc
aatggtggactcatcaagcgaattatccggcagaagcgtgagactgggctaaatgtgacc
ttgccagaggataatcagcctgtggtttttaaccatgtctacaacattaagttacctgtt
ggctccctttgctctgtggacctggatacagcaagcggtgatgcagacctgaaggcggaa
attgagcccatcaagaattatgaggagcacacggtgaacgaggagaaccagattgtcttc
acgcaccgtattaacataccccgccgggcttgtggctgtgcagctgccccagacattaag
gatctgctgagcagactagaggagctggaggggctggtatcctccctacgggagcagtgt
gccagcggggctggatgctgtcctaattcccaggcagtagaaggtcgcctggacacaaca
ccctattgcagtggacgtggcaactacagcatcgagatctgcggctgcatttgcgagcct
ggctggaaaggccccaactgctctgaaccggactgcccacgcaactgcttcaaccggggc
ctctgcgtccagggcaaatgcgtctgcaatgaaggcttcactggcgaggactgcagccag
gccacctgcccatttgactgtaatgaccaaggcaagtgcgtggatggggtttgcatgtgc
tttgaagggtacacaggcaccgactgcagtgaagagctctgcacccaggggtgcagtgtg
catgggaggtgcatgaacgggcagtgcgtgtgccacgagggcttcaccggtgaggactgc
agcgagcccctctgccccaacaactgccacaaccgtgggcgctgtgtggacaatgagtgt
gtctgcaatgagggctacactggtgaggactgcagcgagctcatctgccccaatgactgc
ttcgaccgtgggcgctgcgtcaatgggacctgcttctgcgaggagggcttcactggggag
gactgtggggagctgacctgccctaacaactgcaatggcaatgggcgctgtgagaacggg
ctgtgcgtctgctacgagggcttcgtgggggatgactgcagtgagaagaggtgcccgaag
gactgccacaaccgcgggcgctgtgtgggcgggcgctgcatctgccatgaggggtacctg
ggcgaggactgtggggagctgcggtgccccaatgactgtcacaaccgcgggcgctgcatc
aacgggcagtgcgtgtgccacgaaggattcattggagaggactgtggggagctgcggtgc
cccagtgactgcaacaaccgcgggcgctgtgtcaatgggcagtgtgtgtgccacgaggga
ttcatcggggacgactgtggtgagctgcggtgccccaacgattgcaacaaccatggactc
tgtgtcaatgggcagtgtgtgtgtaacgaggggtacacaggggaggactgtggggagctg
cggtgccccaatgattgcaacaaccgtgggcgctgtgtggaggggcgctgtgagtgtgac
aatggcttcacaggggaggactgcggcgagctgtcctgccccaatgactgccaccagcac
gggcgctgcattgatgggcgttgtgtgtgccacgagggtttcacgggggaggactgccgt
gaacggtcctgccccaacaactgcaacaacgtgggccgctgcatcgacggacggtgtgtc
tgtgaggatggttacatgggtaatgactgctccgatgtgtctcctccaaccgagctgact
gtgacaaacgtaacagataaaaccgtaaatctggaatggaagcatgagaatctcgtcaat
gagtacctcatcacctatgtccctaccagcagtggtggcttagacatgcagttcaccgtg
ccaggaaaccagacagctgccactattcatgaactggagccgggtgtagaatactttatc
cgtgtctttgcaatccttaaaaacaagaagagtattccagtcagtgccagggtagcaaca
tatctgcctgctccagaaggtctgaaattcaaatctgttagagaaacatctgtccaggtg
gagtgggatcctctgaacttttcatttgatggctgggagctggtcttccgtaatatgaaa
aaggatgataatggagatataaccagcagcttgaaaaggccagagacgtcttatatgcag
ccaggtttggcaccagggcaacagtataatgtatcccttcatatagtgaaaaacaatacc
agaggaccaggactatccagagtgataaccacaaagcttgatgcccctagccagatcgag
gcaaaagatgtcacagacagcacagctcttatcacgtggtccaaacccttggctgaaatt
gaaggcatagagctcacttatggccccaaggatgttccaggggacaggacaaccattgac
ctctctgaagatgaaaaccaatattctattggaaacctgaggccgcacacagagtatgaa
gtgacactcatctctcgtcgaggagacatggaaagcgaccctatgaaagaagtctttgtc
acagacttggatgctccaagaaacctgaagcgggtgtcacagacagacaatagcattact
ctggagtggaagaacagccatgcaaatattgataactaccgaattaagtttgctcccatc
tctggtggagaccatgctgagatcacagtgccaaagggcaaccaagcaacaaccagagct
acacttacaggtttgaggcctggaactgaatatggcattggagtgacagcagtaagacag
gacagggaaagcgctcctgctaccattaatgctggcactgatcttgataaccccaaggac
ttggaagtcagtgaccctactgaaaccactttatcccttcgctggagaagaccagtggcc
aagtttgatcgttatcgtctgatttacgttagcccctctggaaggaagaacgaagtagag
atccccgtggacagcacctcttttatcctgcgagggctggaggcagggacagaatacacc
gttagtctggtggcagagaaaggcagacacaaaagcaaacccacaactgtcaagggttcg
actgaggaggaacctgagcttggaaaattatcagtatcggagactggctgggatggtttc
cagctcacctggacagcagctgacggggcctatgagaattttatcattcaggtgcaggag
tctgacaatcctgaagaaacccagaatatcatagtcccaggcggactgcgctttatgaat
gttacaggcctcaaggccaacacaccttataacatcacacttcatggtgtgattcaaggc
tacaggaccaaacccctttctgttgaaaccatgacaggagtgcacccagaagttggtgag
ctaaccgtttccgacattactcctgaaagcttcaacctttcttggacaaccaccaatgcg
gacttcgacgtctttactattgaaattattgattctaacaggttgctggagcccatggag
ttcaacatctcaggcaattcaagaactgctcatatctcagggctttcccccagcactgat
tttattgtctacctctatgggatctctcatggtttccgcacgcaggcaaaaagtgctgca
gctacaacagaagcagaacccgaggtcgacaaccttctggtttcagatgctactccagac
ggcttccgtctgtcctggactgcagatgatggggttttcgacagttttgttctaaaaatc
agggataccaaaaggaaatctgatccgctggaactcatagtaccaggccatgagcgcacc
caggatataacagggctgaaagagggtactgagtatgaaattgagctctatggatttagc
agtggacgacgttcccaacccataaatgcagtagcaaccacagttgttggatctcccaag
ggaatttctttctctgacatcacggaaaactccgctacagtcagctggacaccccctcgc
acccgcgtggagagctaccggatctcctacgtccctgtcacaggaggtactccaaatgtt
gttacagtcgatggaagcaagacaaggaccaagttggtgaagttagtcccaggtgtagac
tacaatgttagtatcatctctgtgaaaggctttgaagaaagtgaacccgtctctggcact
ctgaaaacagctctggacagcccgtcaggcctagtagtggtgaacatcacagactctgag
gctctggcaacctggcagccagcaattgctgctgtggataattacgttgtctcctatgct
tctgaggatgaatcagaagttactcagatggtatcaggaaacactgtggagtatgacctg
aagggccttcgacctgcaactgagtatactctgagtgtccatgcgctgaaggacacgcag
aagagtgagaccctctccacccagtttactacaggactggatgctccaagagatttaagt
gccactgaggttcagtcagaaacagctgtgataacttggaggcctccacgtgctcctgtc
actgattatctcctaatctatgagtccattgatggcagagtcaaggaagtcatcctaaac
cctgagacaacttcctacagcctgacagagctgagcccatctacccagtacacagtgaaa
ctccaggcgctgaacagatccctgaagagcaaaacaatccagaccattttcaccacaact
ggtcttctctatccttaccctaaagactgctcccaggctctcctgaatggagaaaccacc
tctgggctctacacagtttacctgaatggggagaaggctcagcctctgcaagtcttctgt
gacatgggcgaggacgggggcggatggattgtgttcctgaggcgtcaaaatggaaaggaa
gatttctacaagaactggaagacttatgtggctggttttggagatcctaaggatgaattc
tggataggtctggagaacctccacaaaatcacttctcagggccagtatgagctgcgcgtg
gacctgcgggacaaaggtgaggcagcttatgctgtctacgacaggttcaacgttggagac
gcgaagagcagataccggctaagagtggatgggtacagtggcacagcaggtgactccatg
acataccataatggaaggtccttctccacctttgacaaggacaacgattctgccatcacc
aactgtgctttgtcatacaagggtgcattctggtacaagaattgccaccgagtcaatctg
atgggcagatatggtgacaacagccacagtcagggtgttaactggttccactggaagggc
cacgaatattccatccagtttgcggagatgaagctgagaccctccagcttccgaaatctg
gaaggaagacgaaagcgagcgtaa
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integrated database retrieval system
