Aptenodytes forsteri (emperor penguin): 103902135
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Entry
103902135 CDS
T08527
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afor04147
]
103902135 (COL18A1)
00535 Proteoglycans [BR:
afor00535
]
103902135 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
afor00536
]
103902135 (COL18A1)
Exosome [BR:
afor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103902135 (COL18A1)
Proteoglycans [BR:
afor00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
103902135 (COL18A1)
Glycosaminoglycan binding proteins [BR:
afor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103902135 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
103902135
NCBI-ProteinID:
XP_019328629
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MGTRVSLQRPAGPRPENLSAEVSLLELIGDPPPEEILKIYGPDNNPGYVFGPNANTGQVA
RYHLPSPFYRDFSLLFHIQPTTPRAGVLFAVTDSSQSIIYVGVKLSELRVGKQQIIFYYT
EPGSTSSYAAAIFTVPTLLNQWTRFAISVEEDEVVLYLDCEEHERVRFERSPDEMELEDG
SGLFVAQAGGADPDKYQGVIADLKLQGDPRAAEHQCEEEEDDAEEVSGDFGSGAEGGRQP
SGKDRGVPGLVDAIPVTSPPVAAGSGPRSSGGSPQQAERTRAEGTLRVSAGGTGPKGEKG
EKGERGLKGDSGTGSIMGTGSVKGEKGEKGELGVKGSAGFGYPGSKGQKGEPGDPGTPGT
LSQHTNGLMVEQVTGPPGPPGKDGAPGRDGEPGDPGEDGKPGDMGPQGFPGTPGEPGLKG
EKGDPGMGPRGPPGPPGPPGLPGPSSKHDKLTFIDMEGSGFGGDLESLRGPRGPPGPPGP
PGVPGLPGEPGRFGMNLTDLLGPPGLPGRDGTPGPPGPAGPQGPPGRDGAAGQLGPKGEQ
GDVGDLGLPGAPGPKGSKGEMGPAGTPGEMGLAGLPGPIGPRGQPGPPGPPGPPGPVYEA
GFGDMEGSGLPFAASSPGPPGPEGPQGVPGLPGVKGEVGSPGQPGLPGLKGDAGMPGVDG
RPGLEGFPGPQGPKGDRGSPGEKGERGQDGVGLPGPPGPPGPPGQVIAVSSEDKSLAALP
GPEGRPGHAGFPGPVGPKGDRGLSGPQGSPGLKGEKGEPGVIISPDGTVVTAKVKGEKGE
PGLRGPMGPLGPQGRAGMKGEIGFPGRPGRPGMNGLKGEKGDPADVSSVLGLQGPPGPPG
PPGPPGLPGSIVYDSSNAFSDTSHPALPAFPGFHQFPGQKGEKGDAGAPGPPGHFPYDLS
HFGVNLRGDKGDAGPKGEKGEPGSTPLYGPSVSGLPGPPGPQGYPGLPGPKGDSIVGPPG
PPGPQGPPGIGYEGQQGPPGPPGPPGPPSFPGPHRQAISIPGPPGPPGPPGPPGTSATSL
GLRTLPTYQAMLSAMHELPEGGLVFLTDRQELYVRLRGGFRRVLLEEHTLISSSALDNEV
YDKPPSIHXXXXQPRGPLHPLRNHGPPPTARPCRGDEVVANQHRLPEQPLLHHQHELLNS
YYIHRRPDPAPVAAHVHQDFQPALHLVALNAPLSGGMRGIRGADFQCFQQARQVGLAGTF
RAFLSSRLQDLYSIVRRADRAAVPIVNLRDEVLFSNWEALFTGSGAPLRAGARILSFDGR
DVLRDAGWPQKSIWHGSDAKGRRLPESYCETWRTEERAATGQASSLGSGKLLEQAASSCQ
HAFVVLCIENSFMTAAKK
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggggacacgggtgtccttgcagagaccggcgggtccccggccagagaacctgagcgct
gaggtcagcctcctggagctgatcggagaccccccgccggaggagatcctcaaaatttac
ggccccgacaacaaccccggctatgtcttcggccccaatgccaacacgggccaggtggcc
cggtaccacctgccgagccctttctaccgggacttttcccttctgttccacatccagccc
accaccccccgggccggcgtgctctttgctgtcacggactcctcgcagagtatcatctat
gtgggcgtcaagctctcagagctgcgggtgggcaagcagcagatcatcttctactacaca
gagccaggctcaacaagctcatatgcagcagccatcttcactgtgcccaccttgctcaac
cagtggacgcgcttcgccatcagcgtggaggaggatgaagtcgttctctacctggactgt
gaggagcacgagcgggtgcgctttgagcgctccccggatgagatggaactggaagatggc
tccgggctctttgttgctcaggctggaggagctgacccagataaataccagggggtgatt
gccgacttgaagctgcaaggggacccgcgggcggctgagcaccagtgtgaggaagaagag
gacgatgctgaggaggtctctggtgattttggcagcggggcagaaggtggacgccaaccc
tcggggaaagacagaggtgtcccggggctggtggatgccatccctgtcacctctcccccc
gtggcagcgggcagtgggccaaggagcagcggaggctccccacagcaagccgagaggacc
agagcagaggggacactgcgggtctctgcgggaggcactggccccaaaggtgaaaagggg
gagaagggtgagcgtggcctgaaaggggactctgggaccggcagcatcatggggacgggc
agtgtcaagggtgaaaagggggagaaaggagaactgggtgttaagggcagcgctggattt
ggctaccctggctccaagggccagaaaggggagccgggtgaccccggcacccccgggacc
ctctcgcagcacactaatggcttgatggtggagcaggtcactggtcccccagggccgcca
gggaaggacggagcccctggcagggacggcgagcccggcgatcctggcgaggatggcaaa
cccggcgatatgggaccgcaggggttccctgggacgccaggggagcctggtctgaagggg
gagaagggtgacccaggcatggggccaaggggaccgcctggaccacccggtcccccagga
ctgccaggaccctcctccaagcacgacaagctgaccttcatcgacatggagggctctggc
ttcggcggcgacctggagagcctgcggggtccacgagggccacccggtcccccagggcca
cccggcgtgcctggtttgccaggggagccaggacggtttgggatgaacctcacggacctg
ctgggaccaccagggctgccaggcagggatgggacccctgggcccccggggccagcgggt
cctcagggtcctcctggaagagacggggcggctgggcagctggggcccaaaggagaacag
ggcgatgtgggtgaccttggcctccctggtgcaccgggacccaagggcagcaagggagaa
atgggaccagcaggaaccccgggagaaatggggttagctggccttcctgggcccatcgga
ccccgagggcagccgggaccccccggtcccccgggaccaccagggccagtctatgaggct
ggatttggcgacatggagggctcggggctgccgttcgctgccagctcccccggaccaccc
ggacctgaaggaccacagggggtgccgggactgccgggggtgaagggggaggtcggcagc
cctgggcagcccggcttgccaggactgaagggagatgctggcatgcccggcgtggatggc
cgccctggactggagggcttccccggaccgcagggacccaaaggtgacagaggcagcccc
ggtgagaagggtgagcgaggccaagatggtgtggggctgcccggcccccccggtccacct
ggtccccctggacaggtcattgctgtctcaagtgaagataagtctttggcagctttgccc
ggtccagagggcagaccgggtcacgccggcttcccgggcccggtgggaccgaaaggagac
cgggggttgtctggtccccagggctccccagggttgaagggggagaagggggagcctggc
gtcatcatcagccccgatgggactgtggtcactgcaaaggtgaaaggagaaaagggggag
ccagggctgcggggaccgatgggacctttgggtccccagggacgagcagggatgaaggga
gagatcggctttccaggcagacccggacgtcctggcatgaatgggctgaagggcgagaag
ggtgaccccgcggatgtcagtagtgtgctgggcttgcagggtcccccaggacccccgggt
cccccaggcccccctgggctgcctggcagcatagtctacgacagcagcaatgccttcagc
gacaccagccatcccgcgctgccagccttccccggtttccaccagtttccaggacaaaag
ggagagaaaggcgatgccggagccccgggacccccaggccacttcccctatgacctgagt
cacttcggtgtcaacctgcggggtgacaagggggacgcaggtcccaagggcgagaagggc
gagccgggcagcaccccactctacggtcccagcgtctccgggctgccggggcctccgggg
ccccagggctaccccgggctgccaggtcccaagggggacagtattgttgggccaccaggg
cctcccggacctcagggcccccccggtattggatacgaggggcagcagggcccccctggc
cctcctggcccccctggtccaccctccttcccagggccccacagacaagctatcagcatc
cccggccctcccggaccaccaggaccccccgggccaccaggcaccagcgcgacgtccttg
gggctgcgcaccctgccgacctaccaggcgatgctgagcgccatgcacgagctgcccgag
ggtggcctcgtcttcctgaccgaccggcaagaactgtatgtccgcctgcgtgggggcttc
cgccgggtgctgctggaggagcacaccctgatctctagctcggctctggacaatgaggtg
tacgacaagccccccagcatccactnnnnnnnnntccagccccgtggacccctgcacccc
ctccgcaaccacggcccaccacccaccgcccgaccctgtcgcggggatgaggtagtggcc
aaccagcaccgcctgcctgagcaacccctgctccaccaccagcacgagctcctcaacagc
tactacatccaccgccggccggatccagcccccgtggctgcccatgtgcaccaggacttc
cagcccgcccttcacctggtggccctgaacgccccattgagcggcggcatgcgcggcatc
cggggcgctgacttccaatgcttccagcaagcccggcaggtcgggctggccggcaccttc
cgtgccttcctctcctcccgcctgcaggacctctacagcatcgtgcgcagggccgaccgc
gccgctgtgcccattgtcaacctccgggacgaagtgctcttcagtaactgggaagccctt
tttacgggcagcggggccccactgcgagccggcgcccgcatcctctccttcgacggccgg
gatgtcctgcgggatgcaggatggccacagaagagcatctggcacggctcggatgccaag
ggccggcgcttgcccgagagctactgtgagacatggcggacagaggagcgtgctgccacc
ggccaggcttcctcgctgggctctggcaagctgctggagcaggcagccagcagctgccag
catgccttcgtcgtcctctgcatcgagaacagcttcatgactgctgccaaaaagtga
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integrated database retrieval system
