Aptenodytes forsteri (emperor penguin): 103903044
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Entry
103903044 CDS
T08527
Symbol
YTHDC2
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afor03041
]
103903044 (YTHDC2)
Enzymes [BR:
afor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103903044 (YTHDC2)
Spliceosome [BR:
afor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103903044 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
Helicase_C
HA2_C
R3H
DEAD
AAA_19
Ank_2
HA2_N
nSTAND3
AAA_22
Ank
ATPase
Ank_4
PhoH
AAA_23
AAA_7
SRP54
AAA_16
AAA_29
AAA_30
Motif
Other DBs
NCBI-GeneID:
103903044
NCBI-ProteinID:
XP_019328913
LinkDB
All DBs
Position
Unknown
AA seq
1411 aa
AA seq
DB search
MEFPSSFTSTERAFVHRLCQSLGLISKSKGKGANRYLTVRKKDGLELTHAVMTCCLAPST
KHAVRSLIQRFPVTNKERTELLPKTERGNACAVESENRDVNKTSGRLNNGIPQVPVKRGE
SEFDSFRQSLPVFEKQEEIVKIIKDNKVVLIVGETGSGKTTQIPQFLLDDCYKNGTPCRI
FCTQPRRLAAVAVAERVAAERREKIGQTIGYQIRLESRVSPKTLLTFCTNGILLRTLMAG
DSTLSTVTHVIVDEVHERDRFSDFLLIKLREMLQNQTNLKLIISSAALDANLFIRYFGSC
PVIHIQGRPFEVKEMFLEDILRSTGYTNKEMVKYKKEKQREEKQQSTLTEWCSARENNSK
RESQRQRSVPNTTEEYNLLDDGGDTVFNQLTEKDANCLEPWLIKEMDSCLSDIWLHKDID
SFAQVFHLILTENVSVDYRHSETSATALMIASGRGFLSQVEQLISMGASIHCKSSNGWMA
LDWAKRFGQTEVVDLLESYSASVEFGNLDESSLVQTSDSDLSAEDRELLKAYHHSFDDEK
VDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVSLRDRILFDDKRFADNAHRYQVFMLHS
NMQTLDQKKVLKSPPSGVRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTML
KMVWISKASAIQRKGRAGRCQPGVCFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL
APINCPIVDFLMKAPDPPPALIVRNAVQMLKTIDAMDPWEDLTELGYHLTELPVEPHLGK
MVLCAVVLKCLDPILTIACTLAYRDPFVLPTLASQKRAAMLCRKRFTAGTFSDHMALLRA
FQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGADIRDVNT
NSENWAVVKAALVAGMYPNLVHVDRESLVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQ
AAAIQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVSLFCGPARLPSNALQEPSSFRGD
GVSNDNSDSEMEDKTTANLALLKLDEWLHLKLDPEAAGLLLQLRQKWHSLFLRRMRAPSK
PWSQVDETTVRAIIAVLSTEEQSAGLQQPSGIGQRPRPMTSEELPLASTWRSTNSRKSSA
ETEFSDDSSNTEKVLMKSTPPALHQPKKYKEKNILHSKRTSDDRSDQSSVKSTDSSSYPS
PCASPSSPISGKGSKSPSPRPNMPVRYFIMKSSNLQNIDISQQKGIWSTTPSNERKLNRA
FWESSMVYLIFSVQGSGHFQGFARMASEIGCEKSQDWGSAGFGGVFKVEWICKESIPFQF
AHHLLNPWNDNKRVQISRDGQELEPQVGEQLLQLWDHIPLAGKTSTDXLWLLKHQLXPLE
PAACLQYKDEEEGGATSSEVVSHAVQLAVEK
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggaatttccctcttctttcactagtactgaaagagcatttgttcaccggctctgtcag
tctcttggcctgatatctaaaagtaaaggaaaaggagcaaatcgatacctgactgtaagg
aagaaggatggattagaactaacacatgcagtaatgacttgttgcttggctcccagtacg
aaacatgctgttaggagtttaattcagagatttcctgtcacaaataaagaacgaacagaa
cttctgccaaagacggagcgaggaaatgcgtgtgctgttgaatctgaaaacagagacgtg
aacaagacaagcggacgacttaacaacggtatcccccaggttccagtgaaaagaggggaa
tcagagtttgattccttcaggcaatcactaccagtttttgaaaagcaggaagaaattgtc
aaaataataaaggacaataaagttgttctgattgtaggagagactggatcaggaaaaact
actcaaatccctcagttccttcttgatgactgttacaaaaatggaactccatgccgtata
ttttgcactcagccaagacgtttggcagctgttgctgtggctgaaagagtggcagcagaa
agaagagaaaagattggccagacaattggttatcaaatccgattagaaagcagggtttct
ccaaagacactgttaacattttgcactaatggcatactacttcgcacgctaatggcagga
gacagcactctatcaactgtgacccatgttattgtggatgaagtacatgagagggatagg
ttcagtgacttcttgttaataaaactgagagagatgttgcaaaaccagactaatttaaaa
ctaattatttctagtgctgctctagatgcaaatctctttattaggtattttggaagttgc
ccagtaatacacatacaaggaagaccttttgaagttaaagagatgtttttggaggacatt
ttacgaagcactgggtatacaaacaaagagatggtaaagtacaaaaaagagaagcagcga
gaagaaaaacagcaaagcactcttactgagtggtgttctgctcgagaaaataatagcaaa
cgggaatctcagagacaaagatctgtcccaaatacaactgaagagtataatctgttggat
gatggtggtgacacagtatttaatcaactgactgaaaaagatgcgaattgccttgaaccg
tggctaataaaagaaatggattcttgtctttctgacatctggttgcataaagatattgat
tcctttgctcaggtgttccatctcattttaactgaaaatgtcagtgttgattataggcac
agtgaaaccagtgcaactgccctaatgattgcttcagggagaggctttctgagtcaagta
gaacaactgatcagtatgggagcaagtatccactgcaagtcatccaatggctggatggct
ttggactgggctaagcgctttggacagacagaggttgttgacctgttggagtcctacagc
gcttcagtggaatttggaaatctcgatgaaagttccctggtccaaacaagtgatagtgac
cttagtgcagaggacagagaactgttgaaagcttatcatcacagttttgatgatgaaaaa
gtggatctggacctgattatgcacttactttataacatctgtcatagttgtgatgctgga
gcgattttaatatttcttcctggatatgatgagatagttagcctgagggaccgtattctt
tttgatgacaagagatttgctgataatgctcacagataccaagttttcatgcttcattca
aatatgcagactttggatcagaagaaggtgcttaaaagtccaccttctggcgtccgcaaa
ataattctttctactaatattgcagaaaccagcataacggtcaatgatgttgtatttgtt
attgactcaggcaagatgaaagagaagtcttttgatgcactgagttgtgttacaatgcta
aaaatggtgtggatttcaaaagccagtgctatccagagaaaaggcagggctggacgctgt
cagcctggagtctgttttcgtctcttcagcaggctccgatttcagaatatgttggaattt
cagactccagaacttctaagaatgccacttcaggagctttgtttacacacaaaacttctg
gctccaattaattgtccaattgttgactttcttatgaaagctcctgatcctccaccagct
ttaattgtgagaaatgctgtgcaaatgcttaagacaatagatgccatggacccttgggaa
gacctcactgaacttggttatcatctcactgaattaccagtagagccacaccttggtaaa
atggtgttgtgtgctgttgttctgaagtgcctggatcctattcttactattgcttgcact
cttgcatatcgagaccctttcgtcctacctacactggcctctcaaaagcgtgcagccatg
ctgtgtagaaaacgttttactgcaggaacatttagtgaccatatggcgcttctcagggct
ttccaggcatggcagaaggcacgcagtgatggctgggagagagccttctgtgaaaagaac
ttcctttctcaagccacgatggaaatcatcataggaatgagaacacagttgcttggccag
cttagagcctcaggttttgttagagccagaggaggagctgatattagagatgttaatact
aactctgaaaactgggctgtagttaaagctgccttagtggctgggatgtatcccaatcta
gtgcatgtagacagagaaagcttggttttgactggaccaaaggagaagaaagtgcgattt
catcctacctctgttcttagtcaacctcagtataaaaagattccgccggcaaatgggcaa
gctgcagccattcaggcactccctacagactggcttatatatgatgaaatgacgagagct
cacaggatagcaaatatcagatgctgttctgttgtaacacctgtcactgtgtcactcttc
tgtggaccagctagattaccaagtaatgctttgcaggaaccttcatcctttcgaggggat
ggggtatctaatgataacagtgatagtgagatggaggacaaaacaactgctaatttggca
ctactgaagctagatgaatggctccatctcaaactggaccctgaagctgctggtttgctg
ttgcaactcagacagaagtggcatagcttatttctgcgtcgtatgcgagctccttctaaa
ccgtggtctcaggttgatgaaacaactgtaagagcaattatagctgttttaagtactgaa
gaacagtctgcaggtttgcagcagccttcaggaattggtcagagaccaagacctatgact
tctgaagaacttcctttagcatctacatggaggtcaaccaacagtagaaaaagctcagca
gaaactgaattctctgatgactcctctaatactgaaaaagttttaatgaaatctacgcct
cccgcacttcaccagccaaagaagtacaaagaaaaaaacattctgcactccaaacgaact
tcagatgacaggtcagatcaatcatcagtgaagtctacagacagcagtagctatcctagc
ccctgtgctagtccttcctctccaatatctggaaagggttccaaatctccttcaccaaga
ccaaatatgccagttcggtactttataatgaaaagtagcaacttgcaaaacattgatatt
tctcaacagaagggtatatggtctactacaccaagtaatgaacgaaaactaaatagagcc
ttttgggagagcagcatggtttacttaatattttctgttcaagggtctggacactttcag
ggttttgctagaatggcttcagagatagggtgcgagaaaagtcaagactggggatctgct
ggtttcggaggtgtatttaaggtggagtggatctgcaaagaaagcattccttttcagttt
gcacaccatttgctcaacccttggaacgacaataagagagtacaaataagcagagacggc
caggagctggaaccacaagttggagagcagttgctacagctttgggaccatattcctttg
gcaggaaaaacctcaactgattgactgtggttgttgaaacatcagctgtaaccactagaa
ccagcagcgtgcctacaatataaagatgaggaagaaggtggcgcaacaagctccgaagtt
gttagtcatgctgtgcagctagcagtggaaaaataa
DBGET
integrated database retrieval system
