KEGG   Aptenodytes forsteri (emperor penguin): 103903549
Entry
103903549         CDS       T08527                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
afor  Aptenodytes forsteri (emperor penguin)
Pathway
afor03082  ATP-dependent chromatin remodeling
afor03083  Polycomb repressive complex
afor04110  Cell cycle
afor04330  Notch signaling pathway
afor04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:afor00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103903549 (HDAC1)
   03083 Polycomb repressive complex
    103903549 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    103903549 (HDAC1)
   04350 TGF-beta signaling pathway
    103903549 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    103903549 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afor03036]
    103903549 (HDAC1)
Enzymes [BR:afor01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103903549 (HDAC1)
Chromosome and associated proteins [BR:afor03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     103903549 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     103903549 (HDAC1)
    BRAF-HDAC complex
     103903549 (HDAC1)
    REST complex
     103903549 (HDAC1)
    SHIP complex
     103903549 (HDAC1)
    MiDAC complex
     103903549 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     103903549 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103903549 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    103903549 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl RNA_polI_A34
Other DBs
NCBI-GeneID: 103903549
NCBI-ProteinID: XP_009283043
LinkDB
Position
Unknown
AA seq 451 aa
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAV
QEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEK
EEEEKKDEKEEEKAKEEKAEPKGVKEETKST
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaaaccccacaggatccggatgacccacaacctactgctgaactatggcctctacagg
aagatggagatatatcgccctcacaaggcaaatgcagaagaaatgaccaagtaccacagt
gatgactacataaaatttctgagatctattcgcccagataacatgtctgagtacagcaag
cagatgcaaagatttaatgttggggaagactgccctgtgtttgatgggttgtttgagttt
tgtcagctctctgctggaggctcagttgccagtgctgtgaagctgaacaagcaacagaca
gatattgctgtgaattgggcgggaggccttcaccacgctaagaagtcagaggcttctggc
ttctgttatgtcaacgatatcgtcctagctatcttggagctcctaaagtatcaccagaga
gtgctgtatattgacattgacattcaccatggagatggcgtggaggaagccttttatacc
acagaccgtgtcatgaccgtgtcctttcataagtacggagaatacttcccaggaacaggg
gacctacgggatattggtgcgggcaaaggcaagtactacgctgtcaactatcccctccgg
gacggaattgatgatgagtcctatgaggcaatattcaagccggtgatatctaaagtgatg
gagacgttccagcctagcgcagttgtcttgcagtgcgggtcagattctctgtcaggggac
aggctgggttgttttaatctgaccatcaaaggtcatgccaagtgtgtggagtttgtaaaa
agttttaatttgcctatgctgatgctgggaggaggtggctatacgatccgcaacgtggct
agatgctggacctatgagactgctgtggctttggacactgaaattcccaatgaacttcca
tataatgactattttgagtactttggaccagactttaagctccacatcagtccctcgaac
atgactaaccagaataccaatgagtatctcgagaagatcaagcaacgtctctttgagaat
ctgcgcatgctgccacatgcccctggtgtccagatgcagccaattcctgaggatgctgtt
caggaagacagtggagatgaagaggaagaagatcctgagaaacgcatttcaatccgcaat
tctgataagagaatatcctgtgatgaagaattctctgactctgaagatgaaggggaagga
gggcgcaaaaatgttgccaactttaagaaagctaagcgtgtgaaaacagaagaggaaaag
gaggaagaggagaagaaagatgagaaagaagaggaaaaagcaaaagaggagaaagcagaa
cccaaaggggtgaaggaagagacgaaatccacctaa

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