KEGG   Aptenodytes forsteri (emperor penguin): 103903768
Entry
103903768         CDS       T08527                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
afor  Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:afor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:afor03041]
    103903768 (SMU1)
Spliceosome [BR:afor03041]
 Complex B
  Other components
   Complex B specific factors
    103903768 (SMU1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st LisH_TPL Beta-prop_Vps41 Beta-prop_TEP1_C Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_BBS7 Beta-prop_DCAF12 Beta-prop_IP5PC_F TFIIIC_delta DUF7165 KNTC1_N VPS8_N Beta-prop_NOL10_N PROPPIN LisH zf_topless
Other DBs
NCBI-GeneID: 103903768
NCBI-ProteinID: XP_009283309
LinkDB
Position
Unknown
AA seq 514 aa
CRDCALFPCSVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTV
LQAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN
LLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLP
PGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIE
VWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCL
RRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQ
DGHYIISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRS
NTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERT
LTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1545 nt   +upstreamnt  +downstreamnt
tgtcgtgactgcgcgctgttcccctgcagtgtgatccggctgatcatgcagtacctgaag
gagaacagcctccaccgagccctcgccacccttcaggaggaaactaccgtgtccctcaac
actgtggacagcattgagagctttgtggctgacatcaacagcgggcattgggacacagtg
ctgcaagccatacagtcgctgaagctgcccgacaagaccctcattgatctctatgagcag
gttgtgctggagttgattgagctccgggaactaggtgctgccaggtctctcctgagacaa
acagatcccatgatcatgctaaaacaaactcagccggagcggtacatccatctcgaaaac
cttctggccagatcttactttgatcctcgtgaggcatacccagatggaagtagcaaagag
aagcggagagctgctattgcacaagctttagctggagaagtcagcgtggtacctccatct
cgtcttatggcgttgttggggcaggcactgaaatggcagcagcatcagggcctgcttcct
cctggtatgacaatcgacttgttcagaggcaaagcagctgtgaaagacgtagaagaagaa
aagttccccacacagctgagcagacatattaagtttgggcagaagtcgcatgtggagtgt
gctcggttttccccagatggacagtatctggttactggctctgtcgatggtttcattgaa
gtatggaacttcactactggaaagattaggaaggatctgaagtaccaggcacaagataat
tttatgatgatggatgatgcagtgctgtgcatgtgcttcagtagagatacagaaatgcta
gcaactggagcacaggatggaaagatcaaggtgtggaaaatccagagtggtcagtgtctg
agaagatttgaacgagcacacagtaaaggtgttacatgcctcagtttctctaaagacagc
agccaaattcttagtgcttcttttgatcagacaatcaggattcatggtttaaaatctggg
aaaactttaaaggaattccgtggtcattcttccttcgtcaatgaagctacttttacccag
gacggccactatattatcagtgcgtcctctgatggcacagtgaaggtttggaatgtgaag
acgacagagtgctcaaacaccttcaaatctcttggcagcactgctgggacggacattact
gtgaacagtgtcattctgctgcctaaaaacccagaacactttgttgtttgcaacagatcg
aatacagtcgtcattatgaatatgcaaggacaaattgtaagaagtttcagctctggtaag
agagaaggtggtgacttcgtctgctgtgcactttcacctcgtggtgaatggatctattgt
gttggtgaagattttgtgctctattgtttcagcacagtgaccggcaagctggagagaact
ctgactgttcatgaaaaagatgtcattggcattgctcatcacccccaccagaacctgatt
gccacttacagtgaagatggcctcctcaagctctggaagccatag

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