Aptenodytes forsteri (emperor penguin): 103903810
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Entry
103903810 CDS
T08527
Symbol
COL22A1
Name
(RefSeq) collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
afor
Aptenodytes forsteri (emperor penguin)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Motif
Other DBs
NCBI-GeneID:
103903810
NCBI-ProteinID:
XP_009283359
LinkDB
All DBs
Position
Unknown
AA seq
1600 aa
AA seq
DB search
MSITGRCRVPHLLVLLTFVFTGERIEAQRAGCKNVHYDLVFILDASSSVGKEDFEKVRQW
VSNLVETFEIGPDKTRVGVVRYSDHPTTEFDLGKYKTREEIKEAARKIKYYGGNTNTGDA
LRYINTYSFSKEAGGRLSDRTVKKVAILLTDGRSQDYVLDPATATHQAGIRIFAVGVGEA
LKEELDEIASEPKSAHVFHVSDYNAIDKIRGKLRRRLCENVLCPNVHVEGDRFKHTNGGT
DEIPGFDLMDLFSVKQIFGMKENGIQSAYVRLGSFPVVQKTEDVFPQGLPDEYAFVTTFK
FRKASRKEDWYIWQIIDKYGIPQVSIRLDGENKAVEYNAIGLTKDAVRVVFRNARVSDLF
DRSWHKIALSIQSKAVSLYIDCGLVQMLPIEDRENIDIQGKTVIGKRLYDSVPIDFDLQR
MVIYCDSRHADLETCCDIPSGPCQVTVLTEAPPLEVRPTVGNEQVGHLKTVNCSCPAGQK
GERGPIGPEGPKGQKGESGSQGLPGLRGEKGESGRAYGRGEKGEKGSLGSPGPPGKDGAK
GEAGRPGQPGAFGLPGPAGPKGSEGKQGPPGIKGYVGAPGLQGERGEKGTRGVKGEQGLD
GFPGKPGVEGKEGPAGSPGPPGASGTKGEKGTSTGEPGLPGLPGSSVHTEGLKGEQGEPG
LRGPQGQPGLPGPPGEAGLEGKPGVPGLPGQRGKKGEPGFPGINGLIGPQGPPGPPGIAG
PPGPPGAPGLPGEIGVSGKTGPPGPAGLPGKDGLNGLPGLPGQKGEQGEKGEEGFPGKAG
PKGEPGSHGQPGEQGEAGLLGPQGLPGLRGEKGDQGEKGKGGLPGLKGERGEKGDTGSPG
PPGLPGTTAFFTPHPRIPGEPGPKGEKGDPGTSGEPGLPGVPGEQGVPGPAGGQGTKGQK
GARGEAGAPGETGVTGPAGPPGPRGLPGNVGVPGGPGLPGKEGAKGEKGDPGKEGKVGLP
GPAGEPGPAGEPGLPGKGKDGEQGQRGPPGLPGPFGHKGERGAPGLPGQPGDRGVPGIGL
AGPPGPLGPPGDKGSLGPRGVPGIPGPQGPPGQDGLPGNPGERGPPGKPGSSPLLSPEDI
NLLVKDVCSECPPGPPGLPGIPGFKGDKGLRGPPGRDGQDGKMGNAGPRGPAGPPGLDGP
KGAKGDRGMTGDAGEKGEQGHPGIPGFSGAPGNPGPPGTDGAPGQIGPAGNPGDIGKDGP
PGPQGPPGLPGLPGIAGNDGKDGKPGSLGEPGKPGEPGLPGQEGARGLPGFKGQRGDTGP
PGPRGEPGATGPAGREGPPGKDGDTGPIGPQGPRGLRGQPGKNGSPGSAGEPGPAGNPGP
KGNKGENGSPGLPGFVGPRGPPGEPGEKGPPGKEGAPGKPGEIGSRGERVEPGIKGEKGP
QGEKGPPGDPGIPGHKGHPGLMGPHGPPGDTGQVGPPGPPGQPGFPGPRGESPSLETLRR
LIQEELAKQLDAKLAYLLAQIQPAHVKASHGRPGPPGPPGKEGLPGRTGPPGEPGQPGQP
GSEGPPGPIGPKGERGAKGEKGDTGIGQRGEIGPPGIPGLPGEPGYAKDGMPGPPGPQGE
AGVPGLTGPQGPPGANGQCDPTQCAYYASLAARPVNVKGP
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgtccattacaggaagatgccgcgtgccccatctcctagttcttctcacattcgtgttc
accggggagcgaattgaggcacaaagagcaggttgcaagaatgttcactatgaccttgtc
ttcatcttggatgcctcctccagtgtcggaaaagaagattttgagaaagttcggcagtgg
gtgtctaatttggtggaaacttttgagattggcccagacaaaacccgtgtaggtgtggtg
cgatacagcgatcatccaaccacagagtttgacctgggaaagtacaaaacccgtgaggaa
atcaaagaggctgcacgaaaaattaagtattatgggggtaatacgaacactggagatgct
ctcaggtacatcaacacctacagtttttccaaagaagctggtgggagacttagtgatcga
actgttaaaaaagtggctatccttctgactgatggaaggagccaggattatgtcttggat
ccagccactgcaactcatcaggctgggattaggatctttgctgtgggtgttggcgaagcc
ttaaaagaggaactcgatgagattgcttcagaacccaagtctgctcacgtgtttcatgtc
tccgattacaacgccatcgataaaattcggggaaagctgagaagacgtctctgtgaaaat
gttctgtgtccaaatgtccacgtggaaggagatcgattcaaacacaccaatggagggact
gatgagattccaggatttgacctgatggatttgttcagtgtgaaacagatttttggaatg
aaagaaaatggaattcagagcgcttatgtacgacttggaagcttccctgttgttcagaaa
actgaggatgtatttccacaaggtctgcctgatgaatatgcctttgtaactaccttcaaa
ttccggaaggcttccaggaaagaagactggtatatttggcagattattgacaagtatggc
ataccacaggtctcgatccgactggatggagagaacaaagctgtggagtacaatgccatt
gggctcaccaaggacgccgtgagagtggtcttccgaaatgcacgagtcagtgatcttttt
gaccgcagctggcacaaaattgccctcagcattcagtcaaaggctgtctcactttacata
gactgcggactggtgcagatgctgcctattgaagacagggaaaatattgacattcaagga
aagactgtgattggcaaacgcttgtatgatagcgtccccattgattttgatcttcagcgg
atggttatttactgtgattctcggcatgctgacttggagacctgctgtgacattccctct
ggaccatgccaggtcacggtcctgacggaagcacctcccctggaagtgaggcccactgtt
ggcaacgagcaagtgggccacctcaagactgtcaactgctcctgtcctgctggacaaaag
ggggagagaggtccaattggtcctgaaggtcctaaaggtcaaaagggagaaagtggcagc
caagggcttcctgggctcagaggagaaaaaggagagtcaggcagagcctacggcagagga
gaaaaaggagaaaaggggtccctgggctcacctggcccccctgggaaggatggagcaaaa
ggagaagccggtcgaccaggacagccgggagcatttgggctgcctgggccagcaggtcca
aagggatctgagggaaaacagggtcctccaggaattaaaggctacgtaggagcaccgggt
ctacaaggagaaagaggagaaaagggaacacgaggagtcaagggagaacaaggcctagac
gggttccctggaaagccaggtgtggaggggaaagagggccctgctggcagcccgggccct
ccaggtgccagtgggaccaaaggagaaaagggcacatccactggtgaaccaggacttcca
ggattgcctggctcgtcagtgcatactgaaggcctaaaaggagagcaaggagagcctggg
ctacgaggaccacaaggccaacctggacttcctggacctccgggagaggctggtctggaa
ggcaagcctggagtccctggtttaccaggtcaaaggggtaaaaagggagagcctggattc
ccaggaatcaatggtctgatcggccctcagggacctccagggcccccaggcattgctgga
ccccctggaccacctggagcaccaggactgccaggagaaattggagtttctggtaaaact
ggaccaccgggaccagctgggttgcctggcaaagatggattaaatgggcttcctgggctt
ccaggacaaaagggagaacaaggggaaaagggtgaggaaggctttcctggaaaagctggc
cctaagggtgaaccagggagccatggccaacctggtgagcagggtgaagcaggtcttctt
ggtcctcagggattacctggactgagaggagaaaaaggagaccagggagaaaaaggaaaa
ggtggtctcccagggttgaaaggtgaaagaggagaaaagggtgacacgggttcccctgga
ccaccaggtttacctggaacaacagccttcttcaccccacaccctaggattcctggtgaa
cctggaccaaaaggggagaaaggagatccaggaacgagcggagaacctggattacctggg
gtcccaggtgaacaaggtgtcccaggacctgcaggaggacagggcacaaaggggcagaaa
ggagcccgaggtgaagccggagcccctggagagactggtgtgactggaccagcagggccc
ccaggtccgagaggcttgccaggaaatgtgggtgtgcctggaggccctggactaccagga
aaggagggagcaaagggggaaaagggtgatcctggaaaagaaggaaaagtgggtttacct
gggccagctggtgagccagggcctgctggagagccaggtttgcctggtaagggtaaagat
ggagaacaggggcaaagaggcccaccaggcttgccaggaccctttggacataagggtgag
aggggagctcctggcctccctggacagccaggagacagaggtgtgccaggaatcggtctg
gctggaccccctggccctctgggacccccaggagacaaagggtcattgggtccccgcggt
gtacctggtatccctggaccacagggtcctcctggccaggatggtctacctggaaatcca
ggggaaagaggacctcctggaaaaccaggttcctcacccctgctctctccagaggacata
aatctattagtaaaggatgtgtgcagtgaatgccctcctggcccaccaggactgccaggc
atcccgggtttcaaaggtgataaaggtctccgaggaccaccaggtagagatggccaggat
gggaaaatggggaatgctggtcccagaggtcctgcaggcccacctgggctggatggccca
aagggtgctaaaggagaccgtggtatgactggggatgcaggagaaaaaggtgaacagggc
caccctggaatacctggcttctcaggggctcctggaaaccctggtccacctggaacagat
ggggcaccaggacaaataggaccagcaggaaacccaggagacataggtaaagatggccct
ccaggtccacagggcccaccagggctgcctggactgccaggcattgctgggaatgacggc
aaagatggcaagccaggatctcttggggaaccgggaaagcctggagaaccagggctccca
ggccaggagggtgccagaggtttaccgggtttcaaaggacagagaggagatacaggtccc
ccaggtccccggggggagccaggtgcgacaggtcctgctgggcgtgaggggccaccaggg
aaggatggtgatactggtcccataggaccacagggccctcgaggactcagagggcagccg
ggcaagaatggatcgcctggatccgcaggagaacctggcccagcaggtaacccaggtcct
aaaggaaataaaggagaaaacggcagcccaggactccctggcttcgtaggaccccgagga
ccacctggagaaccaggagagaaaggtcctcccggaaaagagggtgcaccagggaaacca
ggtgaaattggctccagaggagagagggtagagcctggcatcaaaggcgaaaaaggccct
caaggagaaaagggccctccaggtgatcctgggatacctggtcataaaggccatccagga
ctgatgggtcctcatggacccccaggagacactgggcaagttggacctcccggtcctcca
ggacagccaggatttccaggaccaaggggggaatccccatctctagagactttgagaagg
ctcatccaagaggaattagccaagcagctagatgcaaagttagcctatctcctggctcag
atacagcctgcacatgtaaaagcatcccatggcagaccaggacctcctggtccccctggg
aaggaaggactcccaggaagaactggccctccgggagagcctggccagcctggccagcct
gggtctgaagggccacctggaccaattggacccaaaggagaaagaggagcaaagggtgag
aaaggagacactggcattggccagcgaggagaaataggtcctccaggaattccaggcctc
ccaggggagcctggctatgccaaagatgggatgccagggccacctggccctcaaggcgaa
gctggtgtgcctggtctcacgggtccacagggacctccgggagccaacggacagtgtgac
cccactcagtgcgcttactatgcaagcctggctgccagacccgttaacgtcaaagggccc
tag
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