Aptenodytes forsteri (emperor penguin): 103903822
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Entry
103903822 CDS
T08527
Symbol
CDKAL1
Name
(RefSeq) LOW QUALITY PROTEIN: threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afor03016
]
103903822 (CDKAL1)
Enzymes [BR:
afor01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
103903822 (CDKAL1)
Transfer RNA biogenesis [BR:
afor03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
103903822 (CDKAL1)
Prokaryotic type
Methylthiotransferases
103903822 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Styelin
Motif
Other DBs
NCBI-GeneID:
103903822
NCBI-ProteinID:
XP_009283371
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All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MTGLVDEGRTVGIVYLDFSTVFDIPHRQADEVWAKYVDGEVDLKLAEWLRRGPRGPLLQC
TLAANAANDRAPPSPCWWPGCMDVPGCAGFLDLRAAGGFTCRLGIQAGQSASGLESPEEL
KSPHLGQSQSCKCLGLTLGLPRPESWTRSSQSLLTLSELEVGFLTERCREPWHSWVVVGW
WTLKAPGLQAGDLIKELRSSKYRNLCSEVDALSVLQLVECVDEPEMVDEALSKTGSRLLC
LRLWENLMVPCYNSAEADFXLLNSCTVKNPAEDHFRNSIKKAQEGKKKVVLAGCVPQAQP
RQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDNGKRLGGARLDLPKIRKNPL
IEIISINTGCLNACTYCKTKHARGDLASYPVEELVDRAKQSFQEGVCEIWLTSEDTGAYG
RDIGTDLPTLLWKLVEAIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQS
ASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDIICGFPGETDEDFQETMKLVEQY
RFPSLFINQFYPRPGTPAAKMHQVPAAVKKQRTKDLSQLFHSYNPYDHKVGERQRVLVTE
ESFDSNYYVAHNPFYEQVLVPKDPPLMGKMVEVNIYEAGKHFMKGQPVSDARVYTASITR
PLAKGEVSGLTEEFRHAPRNGTNWKAHPSAEIPVKTPLSSWMALQLPWQQEGGGLKILSV
SLALLAVLVMFYYGGMKTEL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgactggcttggtagatgaggggagaacagttggtattgtctacctggacttcagtacg
gtttttgacattcctcatagacaagctgatgaagtatgggctaaatatgtagatggtgaa
gtggatttaaaactggcagaatggctgcgcagaggacctaggggtcctttgctgcaatgc
acccttgcagcaaacgcggctaatgatagggctcccccgtctccctgttggtggccaggc
tgcatggatgtcccaggctgtgcagggtttctggatttgagggcagctggtggctttacc
tgccggctggggatacaggcagggcagagtgccagcggactggagagtccagaagaactg
aagtcaccccatctggggcagtctcagagctgcaaatgtttggggcttaccttggggctc
ccaagacccgagtcttggactagaagttctcaaagtctgctgacgctctcggagctggaa
gtgggttttcttactgagagatgccgggagccctggcacagttgggttgttgtgggctgg
tggaccctgaaagcacctgggttgcaggcgggggacttgataaaggagcttcggagcagc
aagtacaggaacctctgcagtgaagtggatgctctctcagttttacagctagttgaatgt
gtggatgaacctgaaatggtagatgaggcgctttcaaagacaggaagccgtctgctctgc
ctgcgcttgtgggagaacctgatggttccatgttacaactctgctgaagcagatttttag
ttgctgaacagttgtacagtaaaaaatcccgctgaggaccacttcagaaactcaatcaag
aaagcccaagaagggaagaagaaagtggttctagcaggctgtgtgccacaagcccaacct
cgtcaggactacctgaaaggcttgagtattataggggttcagcagatagatcgtgtagta
gaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaaaaggat
aatggaaaacgtctggggggagcacgactggatttgccaaagattaggaagaatccactg
atagaaatcatttccatcaatacagggtgtctcaatgcatgtacctactgcaaaactaag
catgctagaggagatctagcaagttatccagttgaagaactagtggacagagccaaacag
tcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggcttatggc
agagacattggcacagacctccctacgcttctgtggaagctggttgaagctattcctgag
ggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctggaggaa
atggcaaagattctcaatcatccaagagtatatgcttttctacacataccggtccagtca
gcctctgacagtgtgctcatggacatgaaaagagaatactgcgtggcagacttcaaacaa
gtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatcatctgt
ggttttccaggagagacagatgaagattttcaagaaacaatgaaacttgtagaacagtac
aggtttccgagcttgtttattaatcaattttacccacgcccaggaaccccagctgcaaaa
atgcatcaagttccagctgcagtgaaaaaacagagaacaaaggatctgtcccagctgttt
cattcatacaatccatatgatcataaggttggtgagaggcagagggttctggttacagaa
gaatcctttgattccaattactatgttgctcacaatcctttctatgagcaggttcttgtg
ccaaaggatcccccgttaatgggtaagatggtagaagtgaatatttatgaagctgggaaa
cattttatgaaggggcaaccagtgtcagatgccagagtttacactgcatccatcaccaga
ccgttagcaaaaggagaagtttctggtttaacagaggagttcagacatgcaccacggaac
ggcacgaactggaaagcacacccttctgctgagatcccagtgaaaacacctctcagctca
tggatggctttgcagctcccatggcaacaagaaggaggtggactgaagatactatctgtc
agtctggctctactggcagttcttgttatgttttactacggaggaatgaaaacagaactg
tga
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