Aptenodytes forsteri (emperor penguin): 103904124
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Entry
103904124 CDS
T08527
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03013
Nucleocytoplasmic transport
afor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103904124 (UPF2)
03015 mRNA surveillance pathway
103904124 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afor03019
]
103904124 (UPF2)
Messenger RNA biogenesis [BR:
afor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103904124 (UPF2)
mRNA cycle factors
P-body specific factors
103904124 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
103904124
NCBI-ProteinID:
XP_009283759
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MPAERKKPANMEEKESPLNNKEKEFSERRPVSTREKPKEDIKVGMKRETLKVPEDKKKKL
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKKKQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQNKDSGKDESRDSKDAKDNKEAPGSEDLELELENLDINDDPLELDCGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
RKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLYK
DLSKVTTEKVLRQMRKLPWQDTEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLDV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQVQDLEREFLIKLGIVNDKDSKD
SITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNEEEEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagccagcaaatatggaagaaaaagaatctccattaaataat
aaagaaaaagaatttagtgaaaggcgaccagtgagcaccagggagaagccgaaagaagac
atcaaggttggcatgaagagggagactttaaaggttcctgaagataaaaagaaaaaactg
gaagaggataaaagaaaaaaggaagacaaggagcggaagaaaaaagaagaggataaagta
aaggcagaagaagagcaaaagaagaaagaagaagaagaaaaaaagaaacttgaagaagag
gagaaaaagaaacaagaggaggaagagaaaaagaaacaagaagaagcagctgctcaactg
aaagaaaaagaggaagcacatcagctccatcaggaggcttgggagcgccatcaggcaaga
aaagagcttcgcagcaaaaaccagaacgcaccagacaatcgccctgaggaaaacttcttc
agcagactagattccagtttgaagaagaacacggcttttgttaagaagctaaaaaccatt
acagagcaacaaagggactccttgtcccatgactttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttctattgtggaagccaaactgaaaatatcagatgtgaactgc
gctgtgcacttgtgttcactctttcaccagcgctatgctgattttgctccttcgctactt
caggcttggaaaaaacattttgaagcaaggaaagaagagaagactcccaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagtcgggattttcactgacaag
gaaggtctgtctttaatctatgagcagcttaaaaatattattaatgctgatcgagaatcc
cacactcatgtttctgtggttatcagcttttgtcggcactgtggagatgacattgctggt
ttggtaccaaggaaagtaaaaactgttgcagagaagtttaacttgagctttcctcctagt
gagataattagcccagagaagcaacagcccttccagaatttgttgaaggaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
aggcgcattcttcactccaaaggagagctgagtgaagatcgacacaagcaatatgaggaa
tttgcaatgtcctatcagaagctgttggcaaattctcaatctctagctgatcttttggat
gaaaatatgcctgaccttccccaagagaaaccaacacctgaggaacatggacctggtatt
gatattttcacaccaggaaagcctggagaatatgacctggaggggggtatctgggaagac
gaagatgctagaaacttctatgagaatctcatcgacttaaaggcttttgtgccagcgatt
ttgtttaaagataatgagaaatgttcccagaacaaggattccggcaaagatgaatcaaga
gattcaaaagatgccaaagataataaggaagcacctgggagtgaggatttggagttggag
ctggagaacctggatattaatgatgatcctctggagttagactgtggagatgaggcagaa
gatcttacaaaaaagcttcttgatgagcaagaacaagaggatgaagaagccagtactgga
tctcatttaaaacttatagtagatgcttttcttcagcagcttccaaattgtgtcaacaga
gacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagccaacaga
agaaaactagtgcgagcacttttcatagttcctagacaaaggttggatttgctaccgttt
tatgcgaggctggttgccacattgcatccctgtatgtctgatgtagcagaggatctttgt
tccatgttgaaaggggatttcagatttcatgtaagaaaaaaggaccagatcaacattgaa
acaaagaataaaactgtgagatttattggtgagcttaccaagttcaagatgttctccaaa
aatgatacgctgcactgtttaaagatgcttctgtcagacttttctcatcaccatattgaa
atggcatgtactctgctggaaacctgtggaagatttctcttcagatcaccagaatctcac
ttaagaaccagtgttcttttggaacaaatgatgagaaaaaaacaagcaatgcatcttgat
gcacgctatgttacaatggtagaaaatgcctattactactgtaatcctcctccagctgaa
aaaactgtgaagaaaaaacgtcctcctttgcaggaatatattcgtaagcttctttacaag
gatctctccaaggtcaccacagagaaagtcctgagacagatgcgcaagctgccttggcag
gatacagaagtaaaagactatgttatatgctgtatgatcaacatctggaatgtgaaatat
aacagtattcactgtgtagccaacctcttagcaggattggtcctttaccaggaagatgtc
ggaattcatgttgtggatggagtgctagaggatattcgactaggaatggaggttaaccag
ccaaagtttaaccaacggcggatcagcagtgccaagtttttgggggagctttacaattat
cgaatggtggaatcggctgtaatatttcgaactctgtattctttcacatcatttggtgtg
aaccctgatggtagtcctagtccactggaccctccagagcaccttttcagaatcagacta
gtttgtacgatccttgatacctgtgggcagtattttgacagaggatccagcaaacgaaaa
cttgattgcttccttgtatattttcagcggtatgtttggtggaaaaaaagtctggatgtt
tggacaaaagaccacccatttcctatagacatagactatatgatcagtgatacactggaa
ctgctgagaccaaagataaagctctgcaattctctggaagaagctatcagacaggtgcaa
gacttggaacgagaattcttaataaaattaggaattgtgaatgacaaagattccaaagat
tccattacagaaggagagaatctggaagaggatgaagaggaggaggaaggtggagcagag
acagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggctct
gacaatgaagaagaagaaggtgaagaagaggaggaagaaaacacggattatcttacagac
tccaataaggaaaatgaaaccgatgaggagaatacagaagtaatgattaaaggaggaggg
cttaagcatgtcccttgtgcagaagatgaggacttcattcaggcattggataaaatgatg
ctggaaaatcttcagcaacggagcggtgaatctgttaaagtacatcagttggatgttgct
attcctctacatctcaaaagtcagctcaagaagggtcccccgcttggaggtggggaagga
gagtcagagtctggagacacaatgccatttgtcatgttaacacgaaaaggcaacaaacag
cagtttaagatcctaaatgtgccaatgtcttcccaacttgctgcaaaccattggaaccaa
caacaagctgaacaggaggagagaatgaggatgaaaaagctcactttggatatcaatgaa
aggcaagaacaagaggactaccaggaaatgttgcagtctctggcacagcgtccagctcca
gcaaatactaatcgtgaacggcggcctcgttaccagcatccgaagggagcacctaatgca
gatctaatctttaaaactggtgggaggagacgttga
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