Aptenodytes forsteri (emperor penguin): 103904201
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Entry
103904201 CDS
T08527
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103904201 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afor03400
]
103904201 (MSH2)
DNA repair and recombination proteins [BR:
afor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103904201 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_27
MutS_I
Motif
Other DBs
NCBI-GeneID:
103904201
NCBI-ProteinID:
XP_019329280
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MNFESFVRDLLLVRHYRVEVYKNKAGSKSIKENDWYLAYKGSPGNLAQFEEVLFANNDMS
TAIGVVGVKLSTTDGQRVVGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLP
VGETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSKKEEQMNSAALPEME
KQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQALNLFQSSVENANT
AQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVVDPELRQCLQEDLLR
RFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNVVQALERHEGAHQMLLLAVFITPLND
IYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKMNELEEKMQSFLKSAAKE
LGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNSKYGIVDTQKNGVKFTNSKLSSVNDE
YIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRP
VILEKGQGRIVLKGARHPCIEMQDEVAFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQT
GVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASEN
SLIIIDELGRGTSTYDGFGLAWAISEYIASKICAFCMFATHFHELTALADQVPTVNNLHV
TALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSKE
SEGEPPAKKFYREREEGEKIIQDFLCQVKALPLTGMSEEDIKIKLKQLRNDVLAKNNSFV
NEIISRTKVTS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaatcttttgtgagagatctgcttctggttcgtcattacagagttgaagtt
tacaagaacaaagcagggagtaaatctatcaaagaaaatgactggtatttagcatacaag
ggttctccaggaaatcttgcccagtttgaggaagttctctttgccaacaatgatatgtca
acggccattggggttgtgggggttaagctgtctactactgatggacaaagagtagtagga
gtggggtatgtcgacactacgctgagaaaattgagtgtctgtgagtttccagataatgac
cagttctcaaaccttgaagctctgctggttcaactaggcccgaaggaatgtgtgctacca
gtaggagagactgcaggcgagatgggaaaactacgacaagttattcagaggggaggaatc
ctgattacagacaggaagaaggcggatttcacaacaaaagatattgttcaggatctcaat
cgcttgttaaaatcaaaaaaagaagaacaaatgaatagtgcagcattgccagagatggaa
aagcaggttgctgtttcgtctttgtcggccattatcaagtttttagagttgctgtcagat
gaatctaattttggacaatttgaactgactacttttgatcttagtcaatatatggttcta
gataatgcagctgttcaagccctcaacctttttcagagttctgtggaaaatgctaacact
gcacagtctctagctggtttactaaataaatgcagaacccctcaaggacaaagactagtt
aatcagtggatcaaacaaccgcttatggacaagaatagaattgaagaaaggttgaatttg
gttgaagcttttgtggtggatccagaactacgtcagtgccttcaggaagatctcttacgt
cgcttcccagatcttaaccggctggcaaagaaatttcagagacaagcagcaaacttacag
gactgttaccgaatgtatcaggctattaatcaactgcctaatgttgtacaagcactagaa
agacatgaaggagctcatcagatgttgttgttggcagtgtttataacacctcttaatgat
atctattctgacttctcaaagtttctggagatgatagaaacaacgttggacatggataag
gtggagaatcatgaatttcttgtcaaggcttcttttgatcctaatttgacagaattaagg
gagaagatgaatgaactggaagaaaaaatgcagtcctttttaaagagtgcagccaaagaa
ctaggtttggaagctggcaaaagtatcaaactggagacaaattcacagttcggacatcac
tttcgaataacttgcaaggaggaaaaagttctccgtaacaattcaaaatatggaatagtt
gatacacagaagaatggtgtgaaatttactaacagcaaactgagctccgtcaatgacgaa
tatataaagaacagagaagagtatgaagaggctcaggatgcaattgttaaggaaatcatt
aacattgcttcaggttatgcagaaccaatacagacgatgaatgatgtgatagctcaatta
gatgcaattgtcagttttgctcatgtgtcaaacggagcaccagtgccctatgtccgtcct
gtcattctggaaaagggacaaggaaggattgtgctgaaaggtgccaggcatccttgcatc
gaaatgcaagatgaggtggccttcatccccaatgacgttacatttgagaagggcaagcag
atgttccacattattactggccctaacatggggggaaaatcaacctacatccgacagaca
ggggtgattgttcttatggcccaaattgggtgttttgtaccatgcgactctgcagaaata
accattgtggattgcatcctggctcgggtgggagccggagacagtcagctgaaaggcgtg
tctactttcatggctgaaatgttagaaactgcttcaatccttaggacagcatctgaaaac
tccctgataatcattgatgagctgggaagaggaacttctacctacgatggctttggctta
gcatgggctatttcagaatacattgctagcaaaatctgtgctttctgtatgtttgctaca
cattttcatgaactgacagctcttgctgaccaagtgccaacagtaaataacctacatgtt
actgctctgaccagtgatgacacactgacgatgctttatcgtgtcaaggaaggtgtttgt
gaccagagttttggaatacacgtagcagagttggcggctttcccaaaacatgtgatagaa
agtgcaagagagaaagcattggagctggaggagtttcaaaacattggcaagtccaaggaa
tctgaaggagaaccaccagccaagaaattctacagagaaagagaggaaggtgaaaagata
attcaggattttctttgtcaagtgaaagcattgccactgacaggtatgtcagaagaagac
atcaaaatcaagctgaaacagctgagaaacgatgtgttggcaaagaacaacagttttgtg
aatgaaatcatttcccgaacaaaagttacatcatga
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