Aptenodytes forsteri (emperor penguin): 103904450
Help
Entry
103904450 CDS
T08527
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03440
Homologous recombination
afor03450
Non-homologous end-joining
afor04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103904450 (RAD50)
03450 Non-homologous end-joining
103904450 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
103904450 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afor03032
]
103904450 (RAD50)
03400 DNA repair and recombination proteins [BR:
afor03400
]
103904450 (RAD50)
DNA replication proteins [BR:
afor03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
103904450 (RAD50)
DNA repair and recombination proteins [BR:
afor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
103904450 (RAD50)
BRCA1-C complex
103904450 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
103904450 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_21
AAA_15
SbcC_Walker_B
DUF2703
AAA_29
AAA_24
AAA_13
Motif
Other DBs
NCBI-GeneID:
103904450
NCBI-ProteinID:
XP_009284215
UniProt:
A0A087RF50
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKMEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSMKVKDCQTELKYLKQNKEKAQEIQDHLTKREAQLAASKEN
VKSIESQLDPLKSSLAAVEQNLIKVMRLDNDVKALESRTRQMEKDNQDLQQKMEKVFQGT
DEQLKDIYQNHQRTVKEKEKRLSDCKRELDRAAKECQRFTSEKSELLVERGRLQLQADRH
QEHITMRDSLIQSLAAQLELDGFERAPFNERHITSFHRLLKERQERDTEAANHLMREFAR
KEAMKQKQIDEIRDKKTGLERTVDLKSDIQNKKQVELKNVRYELQQLEGFSDRILELDQE
IVKTEHELEKAEKNSNVETLELEVQTLQKEKINLDTALRKLDQEMEQLNLHTMTITQMEM
LKKDKADKEEQIRKVKSRHSDELTSLLGYFPNKNQLEDWLHVKNRKINQTRDNLADLNKR
LASVEYHKTYVSNELRRKEAQFCPFEAKLFDVCGSQDFDSDLSKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVVELQDKDIPDLRSKIQNANRDLTGLKSEIEEQESVLRSALS
KEESAKARLQDITLMERYQTDIRDGERKIAQQEAKLLGVDLSRTVLQVSQEKQEKKHLWD
TVTGKIELNQKLKQDQQNQIQQLKSAVNELKAEKLQISSSMQRRRQLEEQTVELTTEVQS
LCREIKEAKEQVFPLDATLEKLQQEKEDLVNKRTASNKETQEKINGIKEKVKDISKYVKE
IENYIQEGREDYKKQKESELEDVNSHLAACEKQKEMISKEMEMIRQDIDTQKVQERWLED
NLTLRKRNEELKEVENNIKSLVKEMGEMKVPQMKNEQKHLEEKIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFKDAEEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagattgagaaaatgagtatcctcggagtgaggagttttggggtagaggataaa
gacaaacaaattatcactttctttaatccgttaactattttggtgggaccaaatggtgca
ggaaaaacgactatcatcgaatgtcttaaatatatctccactggagattttcctcctggc
accaaaggaaactcatttgttcacgatcccaaggttgccaatgaaacagatgttagagct
cagattcgattacagtttcgagatgtaaatggagagctcgtagctgtccagcgatccatg
gtctgtacccagaaaggcaagaaaatggaatttaaaacacttgaaggtgtcattactaga
acaaagcatggcgagaaggtcagtctgagttccaagtgtgcagaaattgatcgagagatg
atcagcgcccttggtgtttccaaatcggtgatcaacaatgtcattttctgccaccaagaa
gaatctaactggccattaagtgaagggaaggccctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtatattaaagcactcgaaactctccgtcaggtacgactgaaacaaagt
atgaaagtaaaagactgtcagacggaactgaaatacctaaaacagaacaaagaaaaagca
caggaaatccaggatcatcttaccaagagagaggctcaactggcggcttctaaggagaat
gtaaaatctattgagagtcaacttgatcctctaaagagttctctggcagcagttgaacag
aatctcataaaagtaatgaggctagacaacgatgtaaaagccctggagagcaggacgagg
cagatggagaaagataatcaagatttgcaacagaagatggaaaaggtttttcaaggaaca
gatgaacaactaaaggatatatatcagaaccaccagagaacagtgaaggagaaggagaag
agattatcagactgtaagcgtgaattagatagagccgctaaagagtgccagagatttacc
agtgagaaatcagaactacttgtcgaacgaggtcgtcttcaactgcaagcagatcgtcac
caagaacacatcacaatgagggattcattaattcagtctctggcagcgcagctggaatta
gatggttttgagcgagcaccttttaatgaaaggcacatcaccagttttcacaggttgttg
aaggagagacaggaaagagatacagaagctgcaaatcatttgatgagagaatttgcacga
aaagaagcaatgaaacaaaaacagatagatgaaataagagacaagaaaactggattagaa
agaaccgttgacctgaaatcagacattcaaaataagaaacaagttgagctgaagaacgta
agatatgaattgcagcagttggaggggttttcagacagaattctggagctggatcaggag
attgtcaagacagagcatgagctggagaaggctgagaagaacagcaatgtagaaacactt
gaactggaagtacaaactctgcaaaaggagaagataaacctggacacagctcttaggaag
ttggatcaagagatggagcagttgaatctacataccatgacaattacccagatggagatg
ctgaagaaagacaaagcagacaaagaagagcagattagaaaagtaaaatcaagacattct
gatgaactgacatcactgttgggatactttccgaataaaaaccaacttgaagactggctt
catgttaaaaatagaaagattaatcagacaagggataatcttgctgaccttaacaaacga
ctggcatcagtagaatatcataaaacttatgtcagtaatgagctaagaagaaaagaagcg
cagttttgtcccttcgaagcaaaactttttgatgtttgtggaagccaagattttgacagt
gatctgagcaaacttcaagatgaaattgaaaaaagttcaaaacagcgagctgtgcttgct
ggagccactgcagtttattcacagttcattacacaactgacagaggagaaccagtcatgt
tgtccagtttgtcaaagagtttttcaaacagaggccgaactgcaagatgtaattagcgat
ctgcagtctaagctgcgtcttgctccagacaaactgaagtcaacagagtctgagcttaaa
agaaaagagaaaaaacgggatgaaatgatgagtcttaaaccacttcggcgaactgtagtt
gaactccaagataaagacataccagacttgaggagcaagatacagaatgcaaacagggat
ttaacaggcctgaagagtgagatagaagaacaggaatcagtcttgcggtcagctttgtct
aaggaggaaagtgccaaggcgcgtttacaggatataacactaatggaaaggtaccagact
gatattagggatggtgaacgaaaaattgctcagcaggaggctaagctgctaggggtcgat
ttaagtagaactgttctacaagtaagccaagaaaaacaagagaaaaaacacttgtgggac
acagttactggtaaaattgagttaaatcaaaaactcaagcaagaccagcaaaatcagatt
cagcagctaaagagtgcagttaatgagcttaaagcagagaaacttcagatttccagcagc
atgcagcgtcgtcggcaactggaggaacaaacagtggaattaaccactgaggttcagtcc
ttatgcagagagatcaaggaagcaaaagaacaggtatttcctttggatgcaactttagaa
aaactgcagcaggagaaggaggatctagtgaataaaagaactgcaagtaataaagaaaca
caagagaagatcaatggcataaaagagaaagttaaagatataagcaagtatgtgaaagaa
attgaaaactatatacaagaaggaagagaagactataaaaagcaaaaggagtctgaactt
gaagacgtaaattctcacttagctgcctgtgagaaacagaaggaaatgataagtaaagag
atggaaatgattcgacaagatattgacactcaaaaggtacaggaaaggtggctagaggat
aatcttactttgaggaaacggaatgaagagctaaaagaagttgaaaacaatataaaaagc
cttgtgaaggagatgggagaaatgaaagtcccgcaaatgaaaaatgaacaaaaacattta
gaggagaaaatagaatctctgaaaagaaaccatcatgttgcacttggccgacaacgtgga
tttgaggaagagattgttcggtttaaaaaggaacttcgagagtcacaattcaaagatgca
gaggaaaaatacagggagatgatgattgttatgagaacaacagagctggtgaacaaagat
ctggacctttattataaggctcttgataaagcaataatgacatttcacagcatgaagatg
gaagaaatcaacaaaataattcgtgacctctggcgaagcacctacagaggacaagatatt
gaatatatagaaattcgttctgatgcagatgagaatgtctcagcctcagataaaagaaga
agttacaattatagagtagtaatgataaagggagatacagcactggatatgcgaggaaga
tgtagtgccgggcaaaaggtgcttgcttctcttattattcgtcttgctctagcagaaaca
ttctgtctcaactgtggcatattggcactagatgagcctactaccaatcttgatcgagaa
aacatagagtctcttgcacatgccctggtggagataataaaaagccgctcacaacagcgt
aactttcagcttctggtgataactcacgatgaagattttgttgaacttctgggccgttct
gagtacgtcgaaacgttctacaggataaagaagaacattgaccagtgctctgagatcatg
aaatgcagtgtcagctccctgggctcatatgttcattag
DBGET
integrated database retrieval system
