Aptenodytes forsteri (emperor penguin): 103905319 Help Entry 103905319         CDS       T08527                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism afor  Aptenodytes forsteri (emperor penguin) Brite KEGG Orthology (KO) [BR:afor00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:afor03021]     103905319 (SETX) Enzymes [BR:afor01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      103905319 (SETX)     5.6.2.5  RNA 5'-3' helicase      103905319 (SETX) Transcription machinery [BR:afor03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      103905319 (SETX) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 AAA_19 AAA_30 Viral_helicase1 UvrD-helicase AAA_22 SLFN-g3_helicase AAA_16 UvrD_C_2 SAS4 Motif Other DBs NCBI-GeneID:  103905319 NCBI-ProteinID:  XP_019329627 LinkDB All DBs Position Unknown AA seq 2822 aa AA seqDB search MSTCRWCTPSGSDTTEFLKSYASKRLSLEDLEGSNDDLCYCLECVVEYHKAREKLPRLHE VLWELETSRLVAHIEKSMREEAGDDDELLIVDENGETQLSGYVGPDFENNLRVPLLEILK YPYLLLHEKVSELCVEVLCRMEQSHNSFQVFEKYPGIYLFLAHPNEVIRRWAILTARNLG KVDRDDYYDLQEVLTCLFKVIELGLFENPDIYSSSMIEKGKLILLPSHLYDTANYKNYWL GICMLLTVLEEQAMESLLLGPDNQNVFMQSIFHTMEKEAADDSTDPFWPALNCFMVILDQ LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRSSFKRTKSEPESVYDDGVVTCSQIVYT CNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGRDMRVHHSTFLWFIPFVQSL MDLKDLGVAYIVEVIHYLCSEIKDIFNERIQQCDKISEFFLLILVSIIELHRNKKCLHLL WISSQEWVEAVVRCAKLPAIAFTRCTEKASGHNVRGSLAVSLQASNSVQHACVQLIRSLL REGYQIGQHALCKKYLDKLNLLLRGSLSLGWQLNIQETQELQMCLRQVIRNIKARALSTP APVGNNANSTTLSTVSIKQEKSAHGDGCNASVHGRDDLCSPFAGISKEGGDEDCQENPFP RRKSAWEEECRDASKSSRSWTSAEGLLNIKKELNDLTTQEYVWPQNSLAAKVYGKVQENR NNDLVAGKCDMDNQCLNPNSQHSDFRRGGELENKCEAGPITPMCLAAQTCTGSPEHAYSS DVKESNMSPSSSLKLKVDARRLTDLKNKIQKIGWPSKVSQPVKLRNVKNCSLGTSASKAE VEQPRFCTGYLCTSKDCHKHQEVNTVCENEISVDTASSRSCESTQEKSVSSAFQSRLVPT KQVSKETPLDCTSSSKNEPGMQENDDGSILFSGISDTLLRKVSTEEKSSSLLKSAFKKDA DMQNSDREQPNLNDLVKYDCKGQISETFGMDKTSANGRVPSSSENQRDISNPASQIRPLS MKCESSDRLFQFSECFKRENNSVGKKGGDCVKTVSEDNALTDSQVDRELSKLSLAAYAKG VNFPFESSQESSVHHNVCDIKRKVKGAVRASNDGQSTKSPCDADCLDNQVIIISDSSDEE EHVADKEETKTVNENMSPEKQPSASSCISDSNNKIETKMPSTPSSLEDCGSQYFEFETEA DIFSFWRDTQAYGMEATQEYKQDHVSVSADSNSDGLLNDRTNEWGYDVDYISDDTMEEEA NLTEKQIENISHQKEADTTKEVTSSTLQESISKENAKDQLENFADKGTVAKDFTLDSKLT EPRASTSNISLASKLALKKNSVSPRKNTAKSEVARTIQRSPKKPPVLKTAQNKKLLQSTS KNSQPGRSMPAVVPPRKVRQCPAPASTVEKLGLKKAPRKAFELSQRSLDSLAQLRSYGKS AGRVGVTQKQKIKLIAPQSMSVKHNKKLLACQDLQFLRQTRPKKSVRVKKVAGSSESRNE KVSKVDAKPMKQKPESFELASVERSVENQREKKREETVCPSSSERKFESLSVEETWVSKM PSSSDSNRKSEDNSMMVPPVPMDSSLSPAALVGHDKDEPSGEGCIVQPECECEKATSKEN GCKPNENSEDDDGLFLTQLDPVDMKLCSEEESVQDTTTASKKPEEMGTAESLQQDESSTI VKCKYKDCMEKVEKPGEYCSKHSATSSEADHSFAKPSLLPPSKPRKPSTAKIFSSASSSR NAAFSKDLEDVKKLPPASKSKVNAAKPVVVRPPNAKAVPIGNQTCRSPSFSNVPEPRISN NVLQSQNRQNDNASNISRRPGREAYFPSFLGARQHGHSIFVNEVLKWTYEMFVNSSQFGS PSNLLQSVVASVPVQFQQYNDYFNTFFPLMMLNAFETLAQEWTENQGAREKSYYFCLQNF CAELNTADFTAHFQESDLATQRHPKEDDLIFLVVQKKKDTFREESEMENHTVNHVGLVKK FCRAPGCLTRQKEQHTVCHLSVQTRGNLSFFINKQVKCVVVGSLVTTHRTFKGLLLLSRS PLAKPIINPSYNDFCPRDLPVASESAVSDMNEYNENQKRAIETAYAMVKQHPGLPKICLI HGPPGTGKSKTIVGFLSRVLGENTRNEKATQKSNAKMKPNRVLVCAPSNAAVDELMKKII IAFKGKCQNRQEPLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADCDQDIQ KKKEALDQQLDMLSRQRAMHRCEKRESQMLNDEIGRLSKERQQLASQLKEVRRHSQNVQA GIILESDIICCTLSTSGGSLLESAFCRQGLDPFSCVIVDEAGQSCEVETLIPLIHRCNKL VLVGDPKQLPPTVKSVEAQQRGYDQSLMARLQRHLEEQVQMNILRSLPVVQLTVQYRMHP DICLFPSNYVYGRTLKTDKATEENRCSSEWPFQPYLIFDVGDGREERDKDSFSNPQEVKL VMELIRTIKEKRKDLGLRRIGIITPYSAQKKKIQEQLDRVFKNNSSPGEVDTVDAFQGRE KDCIIVTCVRANSTKGSIGFLASRQRLNVTITRARFSLFILGRLKTLMENKDWNELIQDA QKRGAIIKTSEKSYREDAVKILKLKPTLQLLPKAGTKTSPLLQACSSSSERGELANPREA SSPRELAAGAGHAVLQGSRGPQQPQGAQAADSRRGSASAPMEAAALPDQEKPRDPRLASM ASRTETKGKEQASKDSSRSAQSNPGSTLQQGLDVSSAARNQISRTESSRKPQQRQCDMPS TSPYAARHKGDWRASVSKSSSKAHSEGGQSSSSKWNKDYRVSTRRTSEDTESNSAKRRKT SH NT seq 8469 nt NT seq  +upstreamnt  +downstreamnt atgagcacatgtcgatggtgtacacctagtggttctgataccactgagttcctgaagagc tatgcttctaaacggttgtccctggaagatctcgaaggatccaacgatgatctctgttac tgcctggagtgtgtggttgaataccacaaagcaagggaaaaattgccaaggttgcatgag gtcttgtgggagttggaaacctcccgtcttgttgcccacattgagaaatccatgcgagaa gaagctggagatgatgatgagttgttaatagtggatgagaacggagagacacagctgtct ggttatgtgggcccggattttgagaataacctgcgagtgccccttctagaaatactgaaa tatccatatctgctgctgcacgagaaagtcagtgagctgtgtgtagaagtgctctgtaga atggaacaaagtcacaactcctttcaggtctttgagaaatatccaggaatttatctcttt ttggcacacccgaatgaagtgattcgtcgatgggccatcctaacagcaaggaatttaggg aaggttgacagggatgattactatgacttacaggaagtgctgacttgcttgttcaaagtt atcgagttggggctttttgagaatccggatatttacagctcttcaatgattgaaaagggt aaactcatccttctgccatctcatttatatgatactgctaactacaagaactattggcta gggatttgtatgttgctaacagtgctggaagaacaagctatggagtccttgttactgggc ccagacaaccaaaatgttttcatgcagtctatatttcacaccatggagaaagaagcagct gatgattctactgaccccttctggccagcgctgaattgtttcatggttattttggatcag ctcggatctaaagtgtggggtcagcttattgatcctgtccaagcctttcaaaccattatc aacagtgtgagctacaacaatgaaataaaaaatatacgcagtagctttaagagaacaaaa tctgaaccggagtcagtctacgatgatggcgtggttacttgcagtcagattgtgtatacc tgtaacacagaaaagcctcaaaaggatactggatggaagactgccatttgtccagactac tgccccaacatgtatgaagatatgcaaacactggctaatgtgcttcagtctgatattggc agagatatgcgtgtccatcacagcacgtttctgtggttcatcccttttgttcagtcactt atggatctcaaggacttgggtgtagcatatatagtagaggtcattcactacctctgctcg gaaatcaaagacattttcaatgaaagaatccagcagtgtgacaaaatctctgaatttttt ctcctgatcttggtgtccattattgaactacacagaaataaaaagtgcctgcatttgcta tggattagctcccaagaatgggtagaagcagtggtgagatgtgctaagcttccagctata gcatttacacggtgcactgaaaaagcatctggacacaatgtgagaggttcattagcagta tctttacaagcttctaactctgtgcagcacgcctgtgtgcagttgatacgcagccttctt agagaaggctatcaaattgggcagcatgctctttgcaagaaatacctagacaaactcaat cttcttctgcgaggaagtctatctttaggttggcagctgaacatccaggaaacgcaggaa ttacaaatgtgtttaaggcaagttataagaaatataaaggccagagcattgagtacccct gcgcctgtaggaaacaatgcaaactctacaactttgtctaccgtttctataaagcaagag aagagtgcacatggtgatggatgcaacgcgagtgtacatggcagagatgacctttgttca ccatttgctggcatatcgaaggaaggcggagatgaagattgtcaagagaaccctttccct agaagaaaaagtgcctgggaagaggaatgtagagatgcatctaaaagttcaagatcttgg acatccgcagaaggcctcttgaatattaaaaaggaacttaatgacttgacaactcaggaa tatgtctggccacagaactctttggcagcaaaagtatatgggaaagttcaggaaaacagg aacaatgatcttgtggcaggtaaatgcgatatggataatcagtgcttgaatccaaattcc cagcattcagatttcagaagaggtggagagttggaaaacaaatgtgaagcaggacccata acaccaatgtgtctggctgctcaaacttgtactggttctccggaacacgcttacagctca gatgtaaaggaaagcaatatgtctcctagttcctctttaaagcttaaagtagatgctcgt agactcacagatttgaaaaacaagatacagaaaattggatggccctcaaaagtatcgcag ccagtgaagctgcgcaacgtgaaaaactgcagtttaggaacaagcgcttcaaaagcagag gtagagcaacctaggttttgcactggctatctgtgtacaagcaaagattgtcataaacat caggaagtgaatactgtgtgtgaaaatgaaatctctgttgatactgcatcttcaaggagc tgtgaaagtacacaggagaaaagtgtcagcagtgcttttcaatccagactggtccccact aaacaggtatcaaaagaaacaccactagattgcactagctcctctaaaaatgaacctggt atgcaggaaaatgatgatggcagtattttgttttcagggattagtgacaccttactgaga aaagtatccactgaagaaaaatcaagttcattgttgaagtctgcctttaagaaagacgct gacatgcaaaattcagaccgggaacagcctaatttaaatgacttggttaaatatgactgt aaaggtcaaatttcagagacatttggtatggataaaacttcagcaaatggtcgtgttcca tctagctctgaaaaccagagggatatatccaaccctgcttctcagatcaggccactgtca atgaagtgtgaatcgagtgacaggttgttccaattttcagaatgtttcaagagagaaaac aattcagtggggaagaaagggggggattgtgtgaagacggtttctgaagataatgcttta acagactcccaggttgatagagaactcagtaaattatctttagctgcgtatgccaaaggt gtcaattttccctttgaatcaagccaagaaagctcagtacatcataacgtatgtgatatt aaaaggaaagtgaaaggtgctgtaagagcttccaatgatggccaaagtaccaagtctccc tgtgatgcagattgccttgacaatcaagtcattataatttcagactcttcagatgaagaa gaacatgtggctgacaaggaggaaacaaaaacagtgaatgaaaatatgtctcctgaaaag cagccttcagcttccagctgcatttctgatagcaataacaaaatagaaacaaagatgcca agcactccctcgtcactggaagactgtgggtctcagtactttgaatttgaaacagaagcg gatatcttttcgttttggcgagatactcaagcgtatggtatggaagcaactcaagagtat aaacaagatcatgtttcagtatcggctgatagtaattcagatggcttactgaacgatcgc acaaatgaatggggttatgatgtggattacataagtgatgataccatggaagaagaagca aacttgacagaaaaacagatagaaaatatttctcatcagaaagaagctgatactacaaaa gaagtaactagttcaacattgcaagaatctattagtaaggaaaatgcaaaagatcaactg gagaattttgcagacaaaggtactgttgctaaagacttcaccctggactcaaaattgact gaacccagagcatctacatctaacatctcattagcttcaaagttggctcttaagaaaaat agtgtgagcccacggaagaatacagcaaaatctgaggtagcaagaactattcaaagaagt cctaaaaaacctcctgttcttaaaacagcacaaaataaaaaactacttcaaagtacgtca aaaaattctcaacctggcaggtcaatgcctgctgtggttcctccaaggaaagttcggcag tgtcctgcaccagcatcaaccgtagaaaaacttggtctgaagaaggcaccccgcaaagcg tttgaattatcccagcgctctttagacagtctagctcaattgcgcagctatggtaaatct gcagggagagttggagttacacagaaacagaagattaaactaattgctcctcagagtatg tctgtaaaacataataaaaaattgctagcctgccaagaccttcagtttttaaggcagacg aggcccaaaaaaagtgtcagagtgaaaaaagttgcaggaagttctgagagtagaaatgaa aaagttagcaaagtggatgcaaaacctatgaaacaaaagcctgaaagttttgagctggca tctgtcgaaagatctgttgaaaaccaaagagagaaaaaaagggaggagactgtttgtccc tcttccagtgagagaaaatttgaaagcctctctgtggaggagacatgggtctccaaaatg cctagttcttcagactcgaacagaaaatcggaggataacagtatgatggttcctcctgta cctatggattcaagtctctctcccgctgcacttgttggacatgataaagatgaaccttca ggagaaggttgcattgtccagcctgagtgtgagtgtgagaaggcaacttcaaaagaaaat gggtgtaaaccaaatgaaaacagtgaagatgatgatggtctgtttttaactcagttagat cctgtggatatgaaattatgttctgaggaggaaagtgttcaagatactactacagccagt aaaaaaccagaggaaatgggtactgctgaaagccttcagcaggacgaatcctcgactatt gtgaaatgtaagtacaaagactgtatggaaaaagtggaaaaaccaggagagtactgtagt aagcattcagccaccagctcagaagcggatcactcgtttgccaaaccttctctcctgcca ccttctaaaccaagaaagccttccactgccaaaattttcagctcggcaagttcttcacgg aatgcagccttcagcaaggatctcgaagatgttaaaaagctaccgccagcttcaaaaagc aaagtgaatgcagcgaaaccggtggtggtcaggccaccaaatgcaaaggctgtaccgata ggaaatcaaacgtgcaggtctccaagtttcagtaatgtacctgaaccccgtatttctaat aacgttctccagtcacaaaatagacagaacgacaacgcttcaaatatttccagaaggcct ggccgagaagcatattttccttcctttcttggtgctcggcagcatggtcatagtattttt gttaatgaagtcctaaagtggacgtacgaaatgtttgtgaactccagccagtttggatct ccaagtaatctcctgcagtctgtagtagcttctgttcctgtccaatttcagcaatacaat gactattttaatacatttttccccttgatgatgctaaatgcctttgaaacactggcacaa gagtggacagaaaaccagggagcgagggagaagagttactacttctgcttacagaatttc tgtgctgaattgaatacagcagattttacagctcattttcaagaaagtgatttggcaacg cagcgtcatccaaaggaggatgacttaatttttttggtggtccaaaagaaaaaagacacc tttagggaagaaagtgagatggagaaccatacagtgaatcacgttggtcttgtgaaaaaa ttttgtcgtgcgcctggctgtttaactagacaaaaggagcagcatacagtctgtcatctt tctgtgcaaactcgaggcaatttgtcattcttcataaataagcaagtgaagtgtgtggtg gttggctccctggtgaccacacaccgaacattcaaaggcctactactattgagcaggagt cccctggctaaacccatcattaatccaagttacaatgacttctgtcccagagatttgcct gtagcttcagaaagtgctgtgtcagatatgaacgaatacaatgaaaatcaaaagagagct attgagacagcttatgccatggtaaagcaacatccagggcttcccaagatctgcctcatc cacggaccacctggaacagggaaatcaaaaactattgttggatttctgtctcgtgttttg ggagaaaacactaggaatgagaaagcaactcaaaaatcaaatgccaagatgaagccaaac cgtgttctagtttgtgcaccatcaaatgctgctgttgatgaactcatgaaaaagatcatc attgcatttaagggaaaatgccaaaacagacaggagcctttgggaaactgtggtgatatc aaattagtgcgactcggtgctgaaaaagcaatcaacagtgaagtccggggatttagcctg gataagcaagttgaacacagaatgaaacgaaagccagctgactgtgaccaggatattcag aagaaaaaagaagctctggatcaacagctggacatgctgtctcgtcagcgtgccatgcac agatgtgagaagagggagagtcaaatgttaaatgatgaaattggcagactttcaaaggag agacaacagcttgcttctcaactaaaggaggttcggaggcactctcagaacgtacaggca ggtatcatcttggagtctgacatcatctgctgcacactgagcacaagtggaggaagtctg ctggaatctgctttttgtcggcaaggacttgatcctttcagctgtgtcattgtggatgag gcagggcagtcctgtgaggttgaaacactgattccactgatccatcgctgtaataaactt gtccttgttggagatcccaagcagctccctcctactgtaaaatcagtagaagctcagcaa cgtggctacgatcagtccttgatggcacgcctgcagagacacctggaggagcaagtgcag atgaacattttacgaagcttgccggttgtgcagctgactgtgcagtacaggatgcaccct gacatctgcctcttcccatccaattatgtttatggcaggactctaaaaactgacaaagca acagaagagaacagatgttcttcagaatggccattccagccctaccttatttttgatgtc ggagacggtcgtgaggagcgagataaggactcttttagtaatcctcaggaagtgaagctg gtgatggaattaattagaacaattaaagaaaaaaggaaggatctgggtcttcgtcgcatt ggaataattaccccttacagcgcacagaaaaagaaaattcaagaacaactggacagagtg tttaagaataacagcagcccaggtgaagtggacacagtggatgcattccagggacgagag aaagactgcatcatagtgacgtgtgtccgggcaaacagcactaaagggtcaattgggttt ctggcaagtcgtcagcgtctgaacgttacaattacccgagccagattcagcctcttcatc cttggaagactgaaaacgctcatggaaaataaagactggaatgagttgattcaggatgct cagaaaagaggtgccattatcaagacatcagaaaaaagctacagggaagatgctgttaag attttgaagctcaagccaacactacagctcctacccaaagcagggacaaagacatctcct ctgttgcaggcttgttcctccagtagcgagaggggtgagcttgcaaatccaagggaggcc agcagcccacgggaactcgctgctggtgctggccatgcagtgctacaaggaagcagaggg ccccagcagccacagggggctcaagctgcagactccaggagaggcagtgcctccgcaccc atggaggctgcagcgcttcctgatcaagagaaaccgcgcgatccaaggctggcaagtatg gctagtagaactgaaacaaaagggaaggagcaggcctcaaaagacagcagtcggtcagcc cagagcaatccaggatcaacgttgcagcaaggcctcgatgtgtcctcagctgccaggaat cagatttccagaacagaaagttctaggaaaccccagcaaagacaatgcgacatgccttcc acgtcgccttacgcagctcggcacaagggtgactggagagcttctgtatcgaaaagcagt tcaaaagcccacagtgaaggaggtcaaagtagtagcagtaagtggaacaaagactatcgt gtttcaacgaggagaacatcagaggacacagaatcaaacagtgccaagcgaagaaagacc tctcactga

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