Aptenodytes forsteri (emperor penguin): 103905401
Help
Entry
103905401 CDS
T08527
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103905401 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afor03400
]
103905401 (LIG3)
Enzymes [BR:
afor01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103905401 (LIG3)
DNA repair and recombination proteins [BR:
afor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
103905401 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
CDC45
aRib
Motif
Other DBs
NCBI-GeneID:
103905401
NCBI-ProteinID:
XP_009285325
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MPTGSRTLSQAARALGRGAGLLFPRTQVSLPRPCLCCAGLPRAGPNYWYQLLLRSVSLRS
TGRNRGGGAGAFHFSLLLHAWLRQACTAAEDMAEQRYCVDYAKRGTAGCKKCKEKIVKGM
VRIGKIVPNPFTESGGDMKEWYHVKCMFEKLEKARATTKKIEDITDLEGWEELQDGEKEL
INKHISEANSKAAGTPKKKVIVQAKLTATGQLTTKDPLALITPSPKKFSGFTAKPKNSED
VSANSSHKSSLSAKKCDPKHKDCLLREFRKLCATVAEKPSYNVKTQIIQDFLKKGSGGDG
FHGDVYLTIKLLLPGVIKIVYNLNDKQIVKLFSRIFNCSQEEMVRDLEQGDVSETVRLFF
EQSKSCPPAAKSLLTIQEVDEFLIQLSKLTKEDDQQSMLQHITCRCTGNDLKCIIRLIKH
DLKMNAGAKHVLDALDPNAYEAFKASRNLQDVVERVLKNQQEAEKMPGLKRALSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV
AHFKDFIPQAFPGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDISLMDRPLCERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMITRVIREGLEGLV
LKDTKGNYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
KSEKWCTVTKCSGGHDDATLARLQTELDMVKISKDPSKIPRWLKINKIYYPDFIVPDPKK
APVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLQQLKELYQLSKEKADF
SVAAGEEDESTAGSSGENEGNSRSSTPHSTTKTPPRKSPAKAQKLEESKAVIGSPQKSEE
KRGEKRKASEMDDNGKKMLLDIFTGVKLYLSPSVKDFDKIRRYFIAYDGDLVPEFDTASA
THVIGDIDENPGAKRVSPKWIWECIRKRRLVAPC
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaggcagcaggacactatcacaggctgcccgggcactcggcaggggcgcagga
cttctcttcccccgcacacaggtctccttgccaagaccctgcctttgctgtgctggcctc
cccagggccggccccaattactggtaccagctgctgttaaggagtgtatctctccggtcc
acaggcagaaaccggggtggtggtgctggggctttccatttctccctgcttttgcacgct
tggcttcgccaagcctgcacagctgcagaggacatggcagagcagaggtactgtgtagac
tatgccaagcgtggcacggcaggctgcaagaagtgcaaggagaagatcgtgaaaggaatg
gtgcgcattggaaagattgttcccaatcctttcacggagtctggcggggacatgaaggag
tggtaccatgtgaagtgcatgtttgagaagctagagaaggcccgggccaccaccaagaaa
atcgaagacatcacagacttggaaggatgggaagagctacaagatggggagaaagaatta
atcaacaagcacatctcagaagctaattccaaggctgcaggtacaccgaaaaaaaaagtg
atagttcaagctaagctcactgccacaggacaactaactacaaaagatccattagctctc
atcactccatcaccaaagaagttctctggcttcacagccaagccaaagaattcagaagat
gtctctgcaaactcttcccacaagtctagcctatctgcaaaaaaatgtgatccgaagcac
aaagactgcttgctgcgagagttcaggaagctctgtgccacggttgctgaaaagcctagc
tacaatgtgaaaacacagatcatccaggattttctgaagaagggatctggaggagatggt
tttcatggtgatgtgtacctgaccattaagctgctgttaccaggcgtcattaaaattgtt
tacaacttgaatgataagcagattgtaaagctgtttagtaggatttttaactgcagccaa
gaagaaatggtccgggacctggaacagggagatgtttccgagaccgtccgcctcttcttt
gaacagagcaagtcttgtcctccagcagccaaaagtctcctgaccatccaagaggtagat
gaattcctaatccagctgtcaaagcttactaaggaagatgaccaacaaagcatgctgcaa
catatcacttgcagatgtacgggcaacgacctgaaatgcatcatcaggctaattaagcat
gacttgaaaatgaatgctggagcaaagcacgtgttggatgctttggatcccaatgcttac
gaggcgttcaaagcatcacgcaacctccaggatgtggtagagcgagtcctgaagaaccag
caggaggctgagaagatgccaggtctgaagcgagccctcagcgtgcaggcctctctgatg
accccggttcagcccatgctggctgaagcctgcaagtcaattgagtatgccatgaagaag
tgcccaaatggcatgtatgcagagatcaaatacgatggcgagcgggtgcaggtccataaa
aatggagaccatttcagctacttcagcagaagcctcaaacctgtcctcccacataaagta
gcccattttaaggacttcatcccccaggctttccctggtgggcaaagtatgatcctggat
tcagaagttcttctgattgacaacaaaactggcaagccacttccttttgggactcttggt
gtgcacaagaaagctgctttccaagatgccaacgtttgcttgtttgtgtttgactgcatc
tatttcaatgacatcagcctgatggacaggcctctgtgtgaacgtcgtaagtttctccat
gataacatggttgaaatccccaaccggatcctcttctcggagatgaagcatgtcacaaaa
gcttcagatctggcagatatgatcacccgagtcatccgtgagggactggaaggactggtg
ttgaaagatacgaagggtaattatgaaccaggaaaacgacactggctgaaagtgaaaaag
gactacctaaatgagggtgcgatggctgacacagcagacctggtggtgctgggagctttc
tacggacaaggcagtaagggtgggatgatgtccatcttcctcatgggctgctatgatccc
aagagtgagaagtggtgcactgtgaccaagtgttccggtggccatgatgatgccaccttg
gcgcgtctgcaaacagagctggatatggtgaagatcagcaaggatcctagtaaaattcca
aggtggctaaaaattaacaaaatctactacccagacttcatcgtcccagatccaaagaaa
gccccagtgtgggagatcacaggggctgaattctctaaagctgaagcccacactgcagat
gggatctccattcgcttccctcgctgcacccgcattcgagatgacaaagactggaagaca
gccaccaacctccagcagcttaaggagctgtaccaactctccaaagagaaggctgatttc
agtgttgctgctggggaggaagacgagtccacagctggcagcagtggggagaatgaggga
aattcccggtcttccacaccacacagcactactaaaactcccccaaggaagtcacctgca
aaagcccagaagctagaagaaagcaaagcagtcattggatcccctcaaaaatcagaggag
aaacgaggggagaagcgaaaagcatccgagatggatgacaatggaaaaaagatgctgctg
gacatattcactggtgtgaagctgtacctgtcgccctctgtgaaggacttcgacaaaatc
aggcggtactttatagcgtatgatggggatcttgtgccagagtttgacacagcctcagca
acacacgttataggggacattgatgagaatcctggtgctaagcgtgtgtctcccaagtgg
atctgggaatgcatccggaaacggagactggtagccccatgctag
DBGET
integrated database retrieval system
