Aptenodytes forsteri (emperor penguin): 103905904
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Entry
103905904 CDS
T08527
Symbol
HELZ
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afor03019
]
103905904 (HELZ)
Messenger RNA biogenesis [BR:
afor03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
103905904 (HELZ)
3'-5' decay
Other 3'-5' decay factors
103905904 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
AAA_22
zf-CCCH_4
AAA_16
AAA_7
Bac_DnaA
AAA_5
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
103905904
NCBI-ProteinID:
XP_019329779
LinkDB
All DBs
Position
Unknown
AA seq
1942 aa
AA seq
DB search
MADRRPEKSCEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEACQAEIDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSFRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWQFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRVVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANTTKQQQSPPKGKVHHHNQNDH
FPPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNMVMSVPLPVPWTGGRGRFAVDPRIITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPV
SIGQQQQLQHQDKEQHEQSRNGKSENTAGPEISKIRTPEKKPVESKQVDLEANSQNRSPE
SRSSVGYPNAKFHRKDNLNPRQLNVHLTPPHSQYAVPNRHFQHVSQIPRQPYPLQQQQNL
LSQQQNHLPEQQNQMPPQQSQVVQQHNHLNQQPPQPSQLSPAYQAGPSQSFFNNPIPHRP
HSPAVDAVISEHHPPPMLQEVNNPLRPIAQHNPVLPTHLNNFIEENPSGMPLGDTLDRMH
GNVALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVRAN
WKLASNTEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQSRLLQYRQVQPRSPPAL
PSPSCNSNHSGHFPNFTENNRDIEIPSNPAFQQHLPQMYNPPFSMPSEHITPSPLKYLQP
DGSWTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQNHQHAVGQEPFHPLTSRAVSA
SSLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSSFNYS
SPELWVNSSSSAPYPNIPCNGANRAVPPRELLAPPKTVRPPEEHLKAENIQLSNSFNYSV
LQHLGQFPPLMPNKQIVESNSNSQQNAGGSKPVMSYASALRAPPKPKPPPEQTKKNSDPL
SLFQELSLGSSSGSNGFYSYFK
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatctcttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggaggcatgccaggcagaaatcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctagccaagggagatggatctttccgtgcagtgctctgc
tgcatgcatcttaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcaggatatcatgtagaagatttagaagaaggg
tcccgggatggctggcagttccgccctccgcccaggggagtcacaagtagtgaagaatat
acactatgtaaaagatttttagagcaagggatctgcaggtacggtgcacagtgtacttca
gcacattcccaggaagagctaacagaatggcaaaaacgatatgcttcccgcttgatcaga
ttaaaacagcagaaggaaaacaaacaatgttcgggcagttatatggaaaccttgattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcctgagctatcggtaactgtcaccaccaaaaagtctcatcagacatgg
acatttgctctcacttgtaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccatcgtccacattttagtatcgttgcaatatctgctggagacagcactacccaggta
tcacaagaagttccagaaaactgtcaggaatggataggaggaaagatggtccagaatgga
atagatcattatatatacaaagtcagtatagcctttaacacagaaatctttggaactttt
cgccaaactgttgtgtttgattttggattagaaccagtcctcatgcaacgagtaatgatt
gatgctgcttcaactgaagatcttgaatacctgatgcatgcacggcaacagctactaacc
acagctaagcgttgggattctacttctaagactattgtagaatttgagcctaatgaaact
actgaattggagaagagccttcttaccagataccaaatccctctatctgctgaccagcta
tttacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcacggctacat
gacctcctttacatagaggaaatagcacagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaagtat
gcccaaaacggacaactttttggccgctttaagctcactgaaacgctttcggaagacact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gagaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aaaacaaaggattatatcttcttgagggtatccagggaatgctgcgaagaacttaatctt
cgggcagattgtgaaatgcaggttgaacttcagtttcagttaaatcgcttacccctctgt
gaaatgcattatgccttggacaggattaaggacaacagtattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacagacaatgggatgagcagttggaccctcga
ctaaatgctaagcagaaagaggctgttctggctatcactactccactttcaatacaactg
cctcctgttcttatcatcggtccctatgggacgggaaaaacgttcactctggctcaggca
gtcaagcacatactccaacaacaggatactagcaggattctcatttgcacccattctaat
agtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagtt
gtgcatcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaa
gacattcttaagcaacgagtagtagttgttactttaaatacatcacagtatctatgtcaa
ctggatcttgaaccaggtttttttacacacattctgttagatgaagctgcgcaagctatg
gagtgcgaaactattatgcccctagcattagctaataaaaacacaagagttgtcttggct
ggagaccatatgcagctcagtccttttgtctacagtgaatttgccagggaaagaaacctt
catgtttcattgcttgatcggctctatgagcactaccctgcagaatttccatgcaggatc
ttgctgtgtgagaactatcgctcccatgaagctatcatcaattatacatccgaacttttc
tatgaaggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctttg
actttcttcacagcacgtggagaagatgtgcaggaaaaaaatagtacagctttttacaat
aatgcagaggtgtttgaagtagtagagcgtgtagaggaattaagaagaaaatggcctgtt
gcctggggcaaattggatgatggcagtataggtgtcgtaacaccttatgctgatcaagtg
ttcagaattcgggctgaacttcggaaaaaaagactgtctgatgtcagtgtagagagagtg
ctaaatgttcagggaaaacagttcagagttttgtttctcagcacagtacgaacacggcat
acatgcaaacataagcaaacaccaattaaaaggaaggagcagttactggaggattcaaca
gaagacttggattatggttttctgtctaattacaaacttctcaacactgccattacaaga
gcacaatccctggtagctgtggtgggagatcctattgctttatgttccattggaagatgc
aggaaattttgggaaaggtttattgccctatgtcacgagaatgaaagtctccacggtatc
acattcgaacagatcaaagctcagttggaagctttggagttaaagaaaacttacgtgttg
aacccactggctcctgagtttatcccccgagctcttcggcatcaacattcagcgaatacc
accaaacaacagcagtcaccaccaaagggcaaggtccatcatcataaccagaatgaccat
ttcccacctgatggaattgttcagcccaatccttctgttctaatcggaaatcctatccga
gcatatacgcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagt
cctgttcaaaggatagatccacacactgggacaagtattctatatgtacctgctgtctat
ggaggaaatatggtcatgtctgtgcctttgcctgtaccatggacgggtggacggggtagg
tttgcagttgaccctcgaatcattactcatcaagcagctatggcatataatatgaacctg
ttacaggcacatgggcgtgggtctcctataccttatggcctgggacatcattcaccagtt
agcataggacaacagcagcagcttcagcatcaagacaaggagcaacatgagcaaagtcga
aatggtaaaagtgaaaacactgctggacctgaaatcagtaaaattcgaacacctgagaag
aaacctgtggaatccaagcaggttgacttagaagcaaactctcagaatagaagcccagag
tcacgttccagtgttggttatcctaatgctaaatttcatcgcaaagataatcttaacccc
aggcagctgaatgtacatctcaccccaccccactcacagtatgcagttcccaatcgccac
ttccagcacgtgtcacagataccaaggcagccatatcctctgcaacagcagcaaaacctt
ttaagtcaacaacaaaatcacttgcctgaacaacaaaaccaaatgccaccccagcaaagc
caggtagttcagcagcataatcatttgaatcagcagcctccgcaaccttcgcagctttcc
cctgcttaccaggcaggccccagccaatctttttttaataatccaattccccaccgacca
cattctcctgctgtagatgctgtgatttcagaacaccaccccccacctatgttacaagaa
gtcaataatcctttgagacctattgcacagcacaaccctgttttgccaacccacttgaac
aacttcattgaagagaatccatcaggaatgcccttaggggacactttagatcgtatgcat
ggaaatgtagctttggaaacaataaggcagcaacaacaagccaggttacagcaatggaat
gaacataatgcctatctcagtcaaggcactattccatatcaacaccatcaccatcctcat
ctaccacatcttcctcagcaaccaattggattgcatcaacagcagcaagttagggcaaac
tggaaacttgccagtaatacagaagatgaaacagaggcaacatactcaagattccaggat
ttgctcagagaactgtcacaccgtgatcaaagtgaaagtcgggacttagctgaaatgcca
ccccctcagtcaagactgttgcaatacagacaagttcagcccagaagcccaccagcactc
ccttctccttcctgcaactctaaccacagcggtcacttccctaacttcaccgaaaacaac
agagacattgaaatacccagtaacccagcatttcagcagcatttaccccaaatgtacaat
ccccctttctcaatgccatctgaacatataaccccatctcccttgaaatacctgcaacct
gatggatcgtggacttatgctaacctacagcagaatcaccttatggggcagggctttcat
tatggtatacctccattgccccataggtcgcaacaaaacccttttatacaaatacagaat
catcagcatgcagttggtcaggagccatttcatccactcacatctcgagcagtatctgct
tcttcgctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaa
agaagaatttcgtctagttcagtccaggcttgttctgaagaattaagcactcctcaagac
agtcttggtcaatgtaaagagcttcaggaccacagtaaccagtcatctttcaactattca
tcgcctgagttgtgggtaaattcctcctcatctgccccatacccaaacattccatgcaac
ggagccaacagagcagttccaccccgggagttgttagctccaccgaagacggtcaggccc
ccagaggaacacctgaaggctgaaaacatacagctatccaattccttcaactacagcgtg
ctacaacatcttggccagttcccacctctcatgcccaacaagcagatcgtcgagtcgaac
agcaacagccagcagaacgctggtgggagcaagcctgtcatgtcctacgcaagtgctctg
cgggctccaccaaagcccaaacctcctcctgagcagacaaaaaagaatagtgaccctttg
tctttgtttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcctat
tttaaataa
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integrated database retrieval system
