Aptenodytes forsteri (emperor penguin): 103906288
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Entry
103906288 CDS
T08527
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afor03009
]
103906288 (IGHMBP2)
03012 Translation factors [BR:
afor03012
]
103906288 (IGHMBP2)
Enzymes [BR:
afor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103906288 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
103906288 (IGHMBP2)
Ribosome biogenesis [BR:
afor03009
]
Eukaryotic type
Other ribosome biogenesis factors
103906288 (IGHMBP2)
Translation factors [BR:
afor03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103906288 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
Helicase_RecD
Viral_helicase1
ResIII
zf-AN1
nSTAND3
DEAD
AAA_16
SLFN-g3_helicase
AAA_22
Flavi_DEAD
UvrD-helicase
AAA_25
IstB_IS21
AAA
ABC_tran
RL
DAP3
UvrD_C_2
DnaB_C
T2SSE
NTPase_1
PhoH
AAA_18
AAA_33
Motif
Other DBs
NCBI-GeneID:
103906288
NCBI-ProteinID:
XP_019329893
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MWSEKIQVILSRVVGRGTWQESVSLKELQRRGVCLLKLQAANQRTGLYGRLLVTFQPRKY
DSDAELPYNSFGPGDIVGLYDSAGQGDPLSTGIVTRVTSKAVTVAFEESRDGMLSLDRES
SYRLLKLANDVTYNRLKKALNALKQYRSGPASDLINVLFFSSDPSAFSETKPLKLYNDSL
DASQREAVSFSLAQRELAIIHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPSNVAVDNLV
ERLAGYKARILRLGHPARLLEPIQQHSLDAVLARGDNAQIVADIRKDIDQAFAKTKKAQD
KGERSHFLSEIKALRKELKEREETAMAAALTRASVVLATNTGASSDGPLKLLPENHFDLV
VIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIISHKAAAKGLSLSLMERLIERYGE
KIVKMLTVQYRMHQAIMQWASSEMYSGRLTAHPSVAQHLLKDLPGVTSTEETAIPLLLID
TAGCGLFELEVEDEQSKGNPGEVQLAGLHIQALVEAGVKAQDIAVVAPYNLQVDMLREHL
CHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVVVIC
DTRTVSNQAFLKRLVDYFSQHGEVRTAFEYLDNLVPENYTQEGRGERQQGAKLPTASGPK
PQLPLGRRLKAAATKPQCQKPEARFSPNTSGPGRESPGTKDSADRFRAMLVAFLESSETQ
LDFPPSLNSHDRMLIHLMAEEYGLQHVSTGEGRDRYISVRKKEPAEPSPPAAARPSKQLP
LPQPQHPSRETPVPAEPERSSQGSGKVDLKTLHLERVQREKARREEAARKAQEPSASLQG
SSRKKDKSEAKGKPSVKSGAGSMAEEDIDALISAAIKAYNTCGFPRCKASVTTLGQLCLH
CNRCYCLSHHIPEVHGCGEKAKAHARQRISREGVLYPGSGSKDKSLDPAKRAHLQRRLDK
KLSELTSQRKSKKKDKEK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcggagaaaattcaggttattctctcccgggtcgtgggacgtgggacatggcag
gaaagcgtctccctgaaggaactgcagcgcagaggcgtctgcttgctaaaactgcaagct
gccaaccagagaaccggcctctatggacggctgctcgtgacatttcagcctagaaaatac
gattcagacgccgagctgccctataacagtttcggtcctggggacattgtgggcctttac
gattcagctggccagggtgatccactctccaccggcattgtaacacgtgtcacctccaaa
gcagtgactgttgcctttgaggagtctcgagatggcatgctgagcttggaccgagagagc
tcttaccgcctgctgaaattagccaacgatgtcacctacaacaggctgaaaaaagcttta
aatgcactaaagcagtatcgcagtggtccagcctctgatctgatcaacgtcctcttcttt
tcttctgatccaagcgcattcagtgaaacaaagcctctaaagctttacaatgactcgctg
gatgcatcgcagagggaggctgtctctttctcactggcacagagggagcttgccatcatc
catggaccacccggcacagggaagaccacaacactagtagagatcatcttgcaagctgta
cagcaaggcctgaaagtcctgtgttgtgccccttccaacgttgctgtggataatctggtg
gaaaggctggctggctacaaagcccgcatccttcggcttgggcaccctgctcgcctgctg
gagcccatccaacagcattccttggacgcagtcttggcccgtggcgacaatgcccagata
gtggcagatatcaggaaggacatcgatcaggcctttgcaaaaaccaaaaaggctcaagac
aagggagagcggagccattttctcagtgagattaaggcactgagaaaggagctaaaggaa
cgagaagaaactgccatggctgcagcccttacccgtgccagtgttgtccttgctacgaat
acaggtgcttcctctgatggcccactgaagctgcttcctgaaaatcacttcgatcttgtg
gtgatagatgagtgtgctcaggcgctggaagccagctgctggatacctctgctgaaggct
cgaaagtgcatcctggccggggatcacaaacagcttccccccaccatcatctctcacaag
gctgctgccaagggcctttcactcagcttgatggagcgtctcatcgagaggtacggggag
aagattgtgaagatgctgacagtgcagtaccgaatgcaccaggccatcatgcagtgggct
tcctcggagatgtacagtggccggctcactgctcacccatcagtagcccagcatttgctc
aaggacctgccgggcgtcacctctacagaagagaccgcaattcccttattgcttatagac
actgctggctgtggcctgtttgagctggaagtggaagatgaacagtctaaggggaatcca
ggggaggtgcagctggccggtttgcacatccaagccttggtggaagctggtgtgaaggca
caagacattgctgttgtggccccctacaacctccaggtggacatgctaagagagcacctt
tgccacaggtacccagagctagaaattaaatcagttgatggtttccaaggaagagagaaa
gaggcagtgatcctgtcgttcgtgcgatccaacaggaaaggcgaggtgggctttcttgca
gaagaccggcggataaacgtagcggtgacccgtgcccggcgccacgtggttgtcatctgc
gacacccgcaccgtcagcaaccaagcctttctgaagcggctggtggattatttcagccag
cacggggaggtacgcacagccttcgagtacctcgacaacctcgtgcccgaaaactacact
caggagggccgcggtgagcggcaacagggcgcaaagctccccacagcatctggccccaaa
ccgcagctgcctctgggaaggagactcaaagcagcagcaaccaaaccacagtgtcagaag
ccagaagcgcgtttctccccgaacacaagcggacccgggagagagagcccggggacaaaa
gacagtgccgacagattcagggccatgctggtggccttcctggagagcagtgagacgcag
ttggatttccctccatctctcaattctcacgatcggatgctgattcacctaatggcagag
gagtatgggctgcagcacgtgagcactggggaaggaagggaccggtacatcagtgttcgc
aagaaagagcctgctgagccttcgccacccgcagccgcccgccccagcaagcagctcccc
cttcctcagccacaacatcccagcagggaaactcctgtccctgctgagccagaaaggagc
agccagggctcagggaaagtggacctgaaaaccctgcacctggagagagttcagagggag
aaagccagacgggaggaggcagcgaggaaggctcaagagcccagtgccagccttcagggc
agcagcaggaaaaaagacaaaagcgaagccaaaggaaagccatcagttaagagcggagca
ggcagcatggcggaagaagatatcgacgctctgatttctgcggccattaaagcttacaac
acttgcggcttcccccgctgcaaagccagcgttacaaccctgggacagctttgtctccac
tgcaacaggtgctactgcctcagccatcacatcccggaggttcacggctgtggggagaag
gccaaggcccacgcgcggcagaggatcagcagagaaggggttctctatcccgggagcggc
tccaaagacaagtccttggacccagccaagagagcccatctccagcggcgcctagataag
aagctcagtgaactgaccagccagagaaagagcaaaaagaaagacaaggagaaatga
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integrated database retrieval system
