Aptenodytes forsteri (emperor penguin): 103906539
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Entry
103906539 CDS
T08527
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03008
Ribosome biogenesis in eukaryotes
afor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103906539 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
103906539 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afor03021
]
103906539 (XRN2)
03019 Messenger RNA biogenesis [BR:
afor03019
]
103906539 (XRN2)
03009 Ribosome biogenesis [BR:
afor03009
]
103906539 (XRN2)
03016 Transfer RNA biogenesis [BR:
afor03016
]
103906539 (XRN2)
Transcription machinery [BR:
afor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103906539 (XRN2)
Messenger RNA biogenesis [BR:
afor03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
103906539 (XRN2)
Ribosome biogenesis [BR:
afor03009
]
Eukaryotic type
Pre-60S particles
RNases
103906539 (XRN2)
Transfer RNA biogenesis [BR:
afor03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
103906539 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
103906539
NCBI-ProteinID:
XP_009286743
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MTVDMAFAFSQLGLWIFREHLKAKECNGVKAPIDTSKPNPNEVEFDNLYLDMNGIIHPCT
HPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASK
EGMEAAEEKQKIRQEILAKGGLLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIADRLN
SDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLAT
HEPNFTIIREEFKPNKPKPCGLCNQMGHEVKDCQGLPREKQGKHDQFADSLPIAEQEFIF
IRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRL
VNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKEKRK
RMKRDQPSFIPGGQFSPQALGNRSSPQAISNPRQAAFEMRMHDRQNSTTSSSPNTSLTSD
GSPSLAGGIKRKAEDSDSEPEPEDNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQSYV
EGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFP
AASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALE
EVYPDLTPEESRRNSLGGDVLFVGKHHPLCDFIVEQYKTKNTEPVDIPPELCHGIQGKLT
LNENAVLPDQTVESPVPMLRDLAQNSAVSISFKDPQFDEDFVFKAIVLPGAKKPAPVLKP
GDWEKTNNDGRPWRPQLSFNRDRKPVHLDQSAFRTLGHTMPRERGMPGMYANAVPLGTYG
SPYTRPLLTGQQQIPKLLSNLRPQESWRGPTPLFQQTPQRTAGAAPLLAWNRMLQSQNQY
QPSQYQGLGGPMSYPQRPEDRMDRGRQAYGPGRPYPLPPPSGRYSWN
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgacatggcattcgccttctcccagctggggctgtggatcttcagagaacat
ctgaaggctaaagagtgcaatggcgtcaaggctccaattgatacaagcaaacctaaccct
aatgaggtggagtttgataacctgtatttggatatgaatggtataattcacccttgtaca
catccagaggacaagccagcacccaaaaatgaagatgaaatgatggttgcgatttttgag
tatattgacaggatcttcaacattgtaagaccaaggcgacttctttacatggctatagac
ggagtagctccacgtgcaaaaatgaatcaacagcggtcaagaagattcagagcatcaaag
gagggcatggaagctgctgaagagaagcaaaaaataagacaagaaattctggcaaaaggt
ggccttcttcctccagaagaagtgaaagagagatttgacagcaactgtattaccccggga
actgagtttatggacaatcttgctaaatgtctccgctattacattgctgaccgtttgaac
agtgacccagggtggaaaaatttgacagttattttgtctgatgctagtgctcctggtgaa
ggtgaacataaaatcatggattacattagaagacaaagagctcaaccaaaccatgaccca
aacactcatcattgtctgtgtggggctgatgctgatctgattatgcttgggttagctaca
catgaaccaaacttcactataattagggaagagtttaaaccaaataaacccaagccatgt
ggtctttgtaaccagatgggtcatgaggttaaggattgccaaggtttgcccagagaaaaa
caaggcaagcacgatcagtttgcagacagtcttcctatcgctgaacaagaatttatcttc
atccgattatgtgttttgcgagagtatttggaaagagaactcactatggccagtttgcct
ttcacttttgattttgaaagaagtgttgatgactgggtctttatgtgcttctttgtggga
aatgactttcttcctcatctaccatctttggagatcagggagggagcaattgatcgcttg
gttaatatatataaaaatgtggtgcacaaaactggggggtacctcacagaaagtggtttt
gtcaacctacagcgagtccagatgatcatgttagctgttggagaagttgaagatagtatt
ttcaaaaagagaaaagacgacgatgataactttaaaagacggcaaaaagaaaaaagaaaa
agaatgaagagggatcagccttcttttattcccggtggacagttttcccctcaagctctg
ggaaatcgatctagtcctcaggcaatcagtaaccctagacaagccgcctttgagatgaga
atgcatgacagacagaactctacaacttcatcatctccaaataccagcctcacttctgat
ggcagcccatccctggcaggaggaattaagcgaaaagctgaagacagtgacagtgaacct
gagccagaggataatatcaggttatgggaaactggttggaaacagcgctactataaaaac
aaatttgatgttgacgcatctgatgagaaattccgtcgtaaagttgtacagtcctatgtg
gaagggctttgctgggttctcagatattattatcagggctgtgcatcctggaactggtat
tacccttttcactatgctccgtttgcttctgactttgagggtattgcagacatgccttca
gattttgagaaaggctcaaaaccgtttaagcctcttgaacaacttatgggagtatttcca
gctgcaagtggaaattttctgccaccgacgtggaggaagctcatgacagatccggaatca
agcataattgacttctaccctgaagatttcgctattgatttaaatgggaagaaatacgct
tggcaaggtgttgcgttattgccgttcgttgatgagcgacgccttagagctgccctggaa
gaagtctaccctgacctcactcctgaagaaagcagaagaaatagccttggtggtgatgtt
ctctttgttggaaaacaccatcctctctgtgactttattgtggaacagtacaagaccaaa
aatacagagccagtggatatacccccagagctgtgccatggaatccagggaaagcttaca
ttgaatgaaaatgctgttcttccagatcagacggtggagtctcctgttccaatgctgcgt
gatcttgcacaaaattctgcagtcagtatctctttcaaagatccacaatttgatgaggac
tttgttttcaaggctatagtgttacctggtgcaaagaaacctgctccagttctgaagcca
ggagactgggaaaaaaccaacaacgatggcaggccttggagaccgcagcttagttttaac
cgagacagaaaaccagtccatttggaccagtcagcgtttagaactttaggccatacgatg
ccaagggaaagagggatgccaggaatgtatgccaatgcagtaccccttggaacttatggg
agcccgtacaccaggccgcttctgactgggcagcagcagattcctaaattgttgtcaaat
cttagaccccaggagtcttggcgaggtcctacacccttgtttcaacagacgccacaaaga
actgctggggctgctcctcttcttgcctggaaccgcatgctgcaatcccaaaatcagtac
cagccaagtcagtaccaggggctgggcggaccaatgagttacccacagagacctgaagat
cggatggacaggggaaggcaggcatatggccccgggaggccctacccgctaccacctccc
tcaggaagatacagctggaattag
DBGET
integrated database retrieval system
