Aptenodytes forsteri (emperor penguin): 103907243
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Entry
103907243 CDS
T08527
Symbol
POLR1A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103907243 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afor03021
]
103907243 (POLR1A)
Enzymes [BR:
afor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103907243 (POLR1A)
Transcription machinery [BR:
afor03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103907243 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
103907243
NCBI-ProteinID:
XP_009287658
LinkDB
All DBs
Position
Unknown
AA seq
1705 aa
AA seq
DB search
MRPPKXPWRRLVGVSFGMYTAEEIRKLSVKPITNPQYLDNVGNPAVNGLYDLALGPPDSK
EVCATCMQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLLL
SQLKVLEKGLLHAVHDLEVILNRFLEQCADATGAEIEEELNHHVHEILQSHQVRDQCSNV
KNVCECRNKLIAQFWKAHMSSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYHKSGEEGSL
DEPAAIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGMDPHESSGFSPDIFFLD
LLVVPPSRYRPVNRVGDRLFTNGQTVNLQAVMKDAKMIRKLLVFMAKEQCQPIKIAEEEI
QTETGENNEPLDNSVLTMIPGQTIADKLYNAWIRLQSHVNIVFDSDMDKLMTEKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQSGLKIVCR
HIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRG
LTDKKGKIKIFPPAIMKPQRLWTGKQVVSTLLINIIPENHVPLNLTGKAKIGGRAWVKGP
ANRCLNLDSMCESQVIIRNGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCLG
RLFTAYLQLYRGFTMGIEDILVKPEADHKRQKIIEKSSQHGIEAVRAALNLPETASCEEV
QGKWQDAHLCKDQRDFNVVDLKFKEEVNSYNNEVNKVCMPLGLHRSFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMESHQANQQFKAIKKWRARHQNS
VQREGGFLMFSQKKMASVKAQIPGGEVKNGRDPATLQLLKMWYELDEKKRRKYLKKTNKC
PDPSLGVWRPDTYFASVSETFENGVKDYINKWESENRRSYMRPALSSDRLKDLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTP
TMSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQKVEIEESLHVKCKQNKHRLYKIKFHFL
PHEYYREEKCVKPREILHFMETRFFKICLEAIKRKNAKVSSFTEVSTRKATRKDLDGDQD
KNNQEAPAEEEENIVDAEADEGDGDATEAKRRKNQEEEVDYESEEENGEENIDENLEDEE
AESEKEERTPSAEDQIGADGDESQHLSFMSQTKKEKDRLLQSAEVRVNAVLDSHPSIQDY
TFDTENELWCEVSLTLPLMKVYFDLSSLLVSLARSTVIHEVKGITRCLLNESTNKQGEKE
LILHTEGINLAELFRYSDILDLNRLYSNDIHAMAKNYGIESALRVIIKEIKDVFAVYGIV
VDPRHLSLVADYMCFEGFYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDELRS
PSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgccgaaanngccgtggcggcggctggttggggtctccttcgggatgtacacg
gccgaggagatcaggaaactgagtgtaaaacccataacaaatcctcagtatttggataat
gtggggaatccagccgttaatggactgtacgacttggctttgggacctccagactccaaa
gaagtgtgtgcaacttgcatgcagaacttcagcaactgccctggtcattttggccatata
gaactgcctctgactgtgtacaaccctctgttttttgataaattataccttctaattcga
ggttcttgtttaaattgtcacatgctgacatgtactcgagctgtggttcacttactgcta
agtcagctgaaggttctggagaaagggttgcttcatgccgtccatgatcttgaagtcatt
ctgaacaggtttttagagcaatgtgcagatgcaacaggtgcagaaattgaagaagagtta
aatcaccatgttcatgaaatactacaaagtcatcaagtaagagatcagtgttcaaatgtg
aaaaatgtatgtgagtgtagaaataaattgatagcacagttctggaaagcacatatgagt
tcaaagaaatgcccaaattgcaaatctaggagatcactagtgcgaaaagagcataacagc
aagctgacagtaacctatccttctacagtgtaccataagtcaggagaggaaggcagcctg
gatgagccagcagctattgatgaaagtcagttagggaagagaggatacctgacaccgatg
actgccaaggaatacatcctggctctgtggaagaatgaaggtttctttctgcgttatctc
ttccctgggatggatccccatgagagttcggggttcagtccagacattttttttttagat
ctacttgtggttccgccttcaaggtatcggcccgtaaatcgtgttggagaccgactgttt
acaaatggtcagacggtgaacttgcaggctgtcatgaaagatgccaaaatgatacggaag
ctcttggtttttatggcaaaagaacaatgtcagccaataaaaattgcagaagaagaaatc
caaacagagacaggagagaataatgaacctctggacaattctgtcctgacaatgattcca
ggacagaccattgcagataagctgtacaacgcttggattcgtcttcagagccatgtcaac
attgtatttgatagtgacatggacaaactaatgacagaaaaataccctggtattcgtcag
ctattagagaaaaaggagggactgttccgcaagcacatgatgggaaagcgtgtggatttt
gctgctcgatcagtcatttgccccgatatgtacattggtactaatgagattggcattcct
atggtatttgctaccaaactgacttaccctcagccagtcactccctggaatgtcaaagag
ctgaggcaggctgtcataaatggcccaaaggttcaccctggggcctccatggtcattaat
gaagatggatctcgtacagtgttgagtgcaagcagcctgacccagagggaagccatagct
aagcagctcctcactccttcttcaggcgcgccccagtcaggactgaagattgtatgtcga
catattaaaaatggagatgtccttttactgaaccgccagcccactcttcatagaccttcc
atccaagctcaccgggcccgaatcctgcctggagaaaaagtgctgaggcttcactatgcc
aactgcaaggcttacaatgccgattttgatggggatgaaatgaatgcccattttccacag
agcgagctgggcagagcagaagcctacaccttagcctttactgatgaacagtatctggtt
ccaaaggatgggaagccacttcctggcttgatccaggatcacatgatttctggagtcagc
atgacaatccggggctgctttttcaccagagagcaatatatggagcttgtttaccgagga
ctaacagacaaaaaaggaaaaattaaaatctttcctcctgccattatgaaaccacagcga
ttatggacaggaaagcaggttgtttctacattgttaataaacataattccggaaaaccac
gtcccactgaatttgactgggaaagctaagattggtggaagagcctgggtaaagggacct
gcaaacagatgtctaaatcttgattcaatgtgtgaatctcaggttattattagaaatggg
gaattactgtgtggagtgttggacaaagctcactttggcagctctgcctatggcctggtc
cactgttgctatgaaatctatgggggtgaaaccagtgggaaggtgctaacatgtctagga
cgtctcttcactgcttacctgcagctgtacaggggatttacaatggggattgaagatatt
ttggttaaacctgaagcagaccacaaaagacaaaaaatcattgaaaagtcaagccagcat
ggtattgaagctgttcgagctgctcttaatttgccagaaactgcatcatgtgaggaggtc
caagggaaatggcaggatgcccatctctgcaaagaccagagggattttaacgtggttgat
ctgaaattcaaggaggaagtaaacagttacaacaatgaagttaacaaggtttgtatgccc
cttggtctccacaggagctttccagagaacaatttgcagttgatggtacagtcaggagcc
aaaggatccactgtaaatacaatgcagatttcttgtttgctgggccagattgagttggaa
ggtcgaagacccccactgatggcatctggcaaatcgctgccatgtttccagccttatgat
ttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcaaaccttct
gaattcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtcaaaacc
agccgttctgggtacctacaaagatgtatcataaaacatttggaaggactggtagttcag
tatgacctgactgtacgagatagcgatggcagtgtggtgcagtttctgtatggagaggat
gggcttgatatccctaaaactcagttcttgcaacctgagcagtttcctttcattgcagaa
aactatgaggtaatccagaagacaaaccatctggatgaagctttagcaaggatggagtct
caccaagctaaccagcagttcaaagccatcaaaaagtggcgagccaggcaccaaaactct
gtgcaaagagaaggaggttttctgatgttttcccaaaagaaaatggcaagtgtaaaagca
cagattccaggaggagaagtcaaaaacggaagagatcctgctactttacagttattgaag
atgtggtatgaactagatgagaagaaacgaagaaagtatctgaagaagacaaataagtgt
cctgacccaagccttggtgtttggcgtccagatacttattttgcgtctgtttcagaaaca
tttgaaaacggagtcaaagattatatcaacaaatgggaatctgagaacagacgaagttat
atgcgcccagcactttcttctgatagattaaaggatttgttgtacttaaagtggcagcga
tctctttgtgacccaggagaagctgtgggtcttcttgcagcccagagtattggggaacct
tccacacagatgactctgaacaccttccactttgctggcagaggtgaaatgaatgtcaca
ttgggtattccaaggttgcgggaaatattgatggtagccagtgcaaatattaaaacgcca
acgatgagtgttcctgtgttcaataccaagaaagctctcaagaaggtgaaacagcttaag
aaacagctcacaagagtgtgcttagctgaggtcttgcagaaagttgagatagaggaatcc
ctgcatgtgaagtgcaagcagaacaaacatcgtctctacaaaatcaaattccatttcttg
ccccatgaatattaccgagaggagaagtgtgtgaagcccagggagatcttgcacttcatg
gaaacaaggttctttaaaatttgtctggaagcaattaaaaggaagaacgcaaaggtgtca
tcttttactgaagtcagcacccggaaggcaactcggaaagatttagatggtgaccaagac
aagaataatcaggaagctccagcagaggaagaagagaacattgttgatgcagaagctgat
gaaggggatggtgatgctacagaagcaaaacggaggaagaaccaagaagaagaggttgat
tatgagagtgaagaagagaatggggaagaaaacattgatgagaatctagaagatgaagag
gctgaatcagaaaaagaagaaaggactcccagtgcagaagatcagattggagcagatggt
gatgaatctcaacatctttcctttatgtctcagactaaaaaagaaaaagatcgattgctt
cagtcagcagaggtgcgagtaaacgctgttctggacagccacccatcaatacaggattac
acgtttgacactgaaaatgaactttggtgtgaggtttcattgacgcttccgttgatgaag
gtgtacttcgatctctcctccttgcttgtctctcttgcacgaagcacagtcattcatgaa
gtgaaggggatcacacgatgcttgttgaatgaaagtaccaataagcaaggagagaaggaa
ctcattctgcataccgaagggataaaccttgcggagctgttcagatactctgatattttg
gacctgaacagactttattccaatgatattcatgccatggctaagaattatggaatcgag
tctgccctgagggtgattataaaggaaataaaagatgtatttgctgtatatggaattgtg
gtagaccctcggcacctttcacttgtggcagattacatgtgttttgaaggattttataaa
ccgctgaatcgttttggaattcagtccaactcctcccctctgcaacagatgacatttgaa
accagctacaaattcttgaaggaagcaacaatgatgggtgcccatgatgaactgcgatcc
ccttctgcatgcctagtggttggaaaagttgttaaaggagggactggtttgtttgacctc
aagcaacctctcacatag
DBGET
integrated database retrieval system
