Aptenodytes forsteri (emperor penguin): 103907645
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Entry
103907645 CDS
T08527
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afor03041
]
103907645 (PRPF39)
Spliceosome [BR:
afor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103907645 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_12
Mad3_BUB1_I
TPR_11
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
103907645
NCBI-ProteinID:
XP_009288137
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MENADNAEEEKPTVSNDGTDNGAETATEEQHMDFSTEIMSVTEMEQSPDSSPDLNEENTQ
ESEIPNIESLQTTDIEACFPPDFDKFWKVVEDNPQDFTGWVYLLQYVEQENHLPAARKAF
DRFFTHYPYCYGYWKKYADLEKRHDNVKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLD
PADPETNSTIRGAYEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTSIYDRILGIPTQ
LYSHHFQRFKEHIQNNLPRDLLTTEQFVQLRRELASVNGHSGEDAQPGDDLPSGTEDITD
PAKLITEIENMRHRIIEIHQEMFNHNEHEVSKRWTFEEAIKRPYFHVKPLEKIQLKNWKE
YLEFEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLP
KKPMVHMLWAAFEEQQGNIDEARRILKTFEECILGLAMIRLRRVSLERRHGNMEEAEHLL
EEAVRNAKSISESSFYAIKLARHLFKVQKNLPKARKVLSEAIEIDKENTKLYLNLLEMEY
SGDLKQNEENILSCFDKAVNGALSIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQALL
KEQDSLKRRAENGSEEPDEKKMLTDDPTLASAQMMDGDMQVNQAAYNYNAWYQVGACFGS
FIQHAHSEYMHVVVFPVTFLCGPVSADEESLE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcagataatgcagaggaggagaagccgactgtaagcaatgacggcacagac
aatggcgctgaaacagcaacagaagaacagcatatggacttcagtacagaaattatgagt
gtaactgagatggaacaatcacctgatagttcccctgacttgaatgaagagaacacacag
gagagtgaaattccaaatattgaaagtttacagacaacagatattgaggcttgcttccct
ccagattttgacaagttctggaaagtagtagaggacaatccccaggatttcacaggatgg
gtatatctactacagtatgtagagcaggagaaccacttaccagctgccaggaaagcattt
gacaggtttttcacgcattatccatattgctatggatattggaaaaagtatgcagacctt
gaaaagcgacatgacaacgttaaacagtctgatgaggtttatcgcagagggcttcaggca
attcctcttagtgttgatctttggatacattatataaacttcttaaaggagaccttggac
cctgctgatcctgaaactaacagtactattcgaggagcctatgaacatgcagttttagct
gctgggacagatttccgttctgacaggctatgggaaatgtatataaactgggaaaatgaa
cagggaaacctaagggaagttacgtccatatacgaccgcatccttggaattccaacacaa
ctctacagtcatcatttccagaggtttaaggaacatatacagaacaacttgcctcgagac
cttctgactactgagcagtttgttcagctgcgcagagaactagcgtctgtgaacggccat
agtggagaggatgcacaacctggagacgacctgccctctggtactgaagatataactgac
cctgccaagctaattaccgagatagaaaacatgaggcacagaatcattgagattcatcaa
gaaatgtttaaccacaatgaacatgaagtcagtaagaggtggacgtttgaagaagcgata
aagaggccttactttcatgtaaaacctctggagaaaattcagctgaaaaactggaaagag
tacttagaatttgagatagaaaatggcactcacgaacgagttgtggtcctctttgaaaga
tgtgttatttcatgtgccctctatgaggacttctggattaagtatgccaaatacatggag
aatcatagtattgaaggagtgaggcatgtctacagcagggcttgcacaatacatcttcct
aagaaaccaatggttcacatgctgtgggctgcctttgaggagcagcagggcaacatcgat
gaagcaagaagaatcttgaaaacatttgaagagtgtattctagggctagcaatgattcgc
ttacgaagagtaagcttagaacgcagacatggaaacatggaagaagctgaacacctgctt
gaagaggctgttaggaatgccaaatcaattagcgaatcgtcgttttatgccatcaaatta
gctcgacacctcttcaaagtacagaaaaatcttccaaaggcaagaaaagtgctgtcagaa
gccatagaaattgacaaagaaaatacgaaactgtatctcaacttacttgaaatggagtac
agtggcgatctcaagcaaaatgaagaaaacatcttgagctgttttgataaagctgtcaat
ggcgcgttgtctataaaaatgaggattacgttttctcagcgaaaagtggaatttcttgaa
gattttggttctgatgtaaacaagcttttggatgcctacgatgaacatcaagcacttctg
aaggagcaggattctttaaaaaggagagcagagaacggatcagaggagccggatgaaaag
aaaatgctcacagacgacccaactttggcatcagcacagatgatggatggagacatgcaa
gtcaatcaggcagcgtataactacaacgcctggtaccaggtaggtgcatgctttggttcc
ttcattcaacacgcgcattctgaatatatgcacgttgtggttttcccagtgacgtttctc
tgtggcccagtgtcagctgatgaggaaagtttggagtaa
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