Aptenodytes forsteri (emperor penguin): 103907823
Help
Entry
103907823 CDS
T08527
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103907823 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afor03019
]
103907823 (PNLDC1)
Enzymes [BR:
afor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103907823 (PNLDC1)
Messenger RNA biogenesis [BR:
afor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103907823 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
103907823
NCBI-ProteinID:
XP_019330351
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MREQEASLPQQSVAFSVAALDTEFTGLHSTFPQNNEPSLFDSPEERYLKARQSVQRFTVT
QLGLAIFSNENSNKYVVHSYNFFLFPSTLGVTDVEFTLSASSIQFLSHYGFDYNKFLKDG
IPYMNEAQEKILSQQLLGGSWKVSSALDRDVLKKAIDEVTCWIAAAEEEETMILQDLSGY
QMFEVQLVLRQALQNVWTQPLGDKKVMVKKVSPQHRQLLENSPYDCCQKELILLSARGFT
NVFQTLVEAKKPLVGHNMLMDLMHLHDKFYKPLPESYEEFKRNIHNLFPVLIDTKTVTKS
IWKKCPFPRVSNLLEVYAVLCSSNLNPKDPTCPVIALASDCSRYAEKKSPHEAGYDAFLC
GSVLLKSAHLLLCRSTDDAVEADPSFSQYLTVLAEYLNKVNFIRGGVSSINFSGEDAPCQ
HPPLLVVHVRGWPGLNERQIYQEFKALCRFDVRRLSKNQFILLSNKFKHVRCVLRDYKHH
PHLRVSVYRHWRHSPCVNCLLQVSGIVALWSLLAFVLGGAPCCSF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagggagcaggaggcttcgctcccacagcagtcggttgccttttcggttgcggccctt
gatacggagtttactggcttacattcaactttcccacaaaataatgaacccagcctgttt
gattcccctgaggagcggtacctgaaggccaggcagagtgttcagcgcttcactgttact
cagcttgggctggcaatattctcaaatgaaaattcaaacaagtatgtggtgcattcatac
aacttttttctctttccctcaacattgggggttacggatgtcgaattcaccctctctgca
tctagcattcagttcctgtctcattatggctttgactataataagttcctcaaagatgga
atcccgtacatgaatgaggcacaggagaagatccttagccagcaactcttggggggtagc
tggaaggtcagcagtgctctggacagggatgtgctgaagaaggctattgatgaagtgacc
tgttggatagctgcagcagaggaagaggagactatgattctgcaggatctgagtggctat
cagatgtttgaagttcagctggttctgagacaggctctccaaaatgtttggacacagcct
cttggagacaagaaggtaatggtgaaaaaagtgagtccacagcatcgtcagcttctggag
aactctccttatgactgctgccagaaggaactcattctcctgtctgcccggggcttcacc
aatgtcttccagacacttgttgaagccaagaagcccctggtgggacacaacatgcttatg
gaccttatgcatcttcacgacaagttctacaagccccttccagaaagctatgaggagttt
aaaaggaacattcacaacctgtttcctgtcctcatagacaccaagactgtaacgaaatcc
atctggaagaaatgtccgtttcctcgagtatctaatcttttggaggtgtatgcggttttg
tgcagcagcaacctaaatcccaaagatccaacgtgcccagtgatagctcttgcaagtgac
tgctcaagatatgctgagaagaaatctcctcacgaggcaggctatgatgcatttctctgt
ggttcagttcttctgaagtcagctcatttgctactgtgcagatccacagatgatgcagtg
gaggctgatccttctttctctcagtatctcaccgtgttagccgagtatctgaacaaagtg
aatttcatccgaggtggtgtttcaagcattaatttttctggggaagatgctccctgccaa
catccccctctcttggttgtccatgtccgaggctggccagggctgaatgaaaggcagatt
taccaagagtttaaagctctttgtcgctttgatgtcagacggctttcaaagaaccagttc
attctgctctccaataaatttaagcacgtcaggtgcgttctgcgagattacaagcatcac
cctcatctgcgggtttccgtctatcgccactggaggcactctccgtgcgtgaactgcctg
ctgcaagtctctggtattgtggcactgtggtctctcttggcctttgtactcggaggagct
ccctgctgttcattctaa
DBGET
integrated database retrieval system
