Aptenodytes forsteri (emperor penguin): 103908440
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Entry
103908440 CDS
T08527
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103908440 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afor03019
]
103908440 (EDC4)
Messenger RNA biogenesis [BR:
afor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103908440 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
103908440 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
NBCH_WD40
WDR55
Motif
Other DBs
NCBI-GeneID:
103908440
NCBI-ProteinID:
XP_009289098
LinkDB
All DBs
Position
Unknown
AA seq
1410 aa
AA seq
DB search
MAKAACGRREGWAAVWGYSPPLNNPTEPFRSETSGSVNENQRPSNSYNGDLNGLLVPDPI
VAGDGPSLAKPVHRSISLGALQEKQVICLSGDDSSTCVVISAKDVEVVASSDSSITSKAR
GSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLK
GFTGGVADLAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPDNTPLNTSR
RIIWCPFIPDDNEESGEEGSQTLALLHEDRAEVWDLDIIRANNSSWPVEVPSIKEGFIVV
KGHSTCLSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHEGRPLSCLLF
CDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVC
LDLSAEYLILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLR
HTEVLPAEEENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMSA
SMPSHGSHEEFAFPDHMADLSTEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKP
KLMTPDAFMTPSTSLQQIAVSPGSSVSSLTAVTAMSSTSVTDASMPRPSEDLTVSPKMQL
DTSLTLSSSSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVTPGNPSLALELQEVEPLVVPQ
ASPTRERSPDVISSASTAMSQDIPEIASETLQRSFAAAPSGLPAEVLEPSHHADSMASAA
SALHLLSPRNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAP
DITRETRNSMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTS
GGFGAKASTQRLPVKDWKAKASPRASPKLKRKGKKDDGDVNQSPRSSNNQVTPEFQDELM
CILRSQQRELSELRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTE
GQQRNGQLQEHLSQQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMDPIAGQLSNTIA
AKLTAVEGTLKESITKLVKSKNLTDTVVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQ
SMFQQINDTFKQGTQEYIQQLETHLKNKKVREQEARDPLLNQLRQLISTFQSTTEQLAST
VAASVHAEVQHQLHIIVSNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAG
TPIPSAHLDFQSQQTHILQLLQQGQLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPC
PLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQ
FLQVEPHNTLSKPARRLMIMLQGLVTPGMT
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagccgcctgcggtcggagggaaggctgggcagccgtttggggttattctccc
cccctaaacaacccgactgagcccttcaggagtgagacttcgggttcagtgaatgagaac
caaagaccgtcaaattcctataacggagacctgaatggactgctggtgcccgatcccatc
gtggccggagatggaccttctttggctaagccagtgcatcgcagcatttctctgggagcc
ctgcaggagaagcaagtcatctgcctttccggtgatgacagctccacttgtgtcgtgatt
tcagcaaaagatgtggaggtagtggccagcagtgattccagcatcaccagtaaggccaga
gggagtaataaggtgaaaatacagcctgttgctagatatgactgggagcagaaatactat
tatggcaatctgatagctgtttcaaactcttacctggcttatgccattagagctgccagt
aatggctccgctatggtgcgggtgttgagcgtcagcactgctgagcggaccttgctgaaa
ggattcacaggcggtgtggcagacctggcttttgctcatctcaactccaaccagctggcg
tgcctggatgaggccggcaacctttttgtctggcgcctggccatggataaagaaaaaatc
caagaggagatcttggttaacatcaagcgacctgacaataccccgttgaacacctctcga
agaatcatctggtgccctttcatcccagatgataacgaggagagcggtgaagaaggaagt
cagacattggcgttgttgcacgaggacagggcagaggtgtgggatttggacattatccga
gcgaacaacagctcctggccggtggaagtgcctagcatcaaagaaggcttcatcgtagtg
aaaggccacagcacgtgcctgagcgagggagcactttctccagatggaactgtgttggcc
acagcaagccatgatggtttcgtcaaattctggcagatctatattgaggggcaagacgag
ccaaggtgtcttcacgagtggaagccccatgagggtaggcctctttcctgcctgctcttc
tgtgacaaccataaaaaacaagacccagaggttcccttctggaggtttctcatcacagga
gcagatcagaatagagaactgaagatgtggtgcactgtgtcttggacgtgtctgcaaact
gtccgattttctcctgacatcttcagctccatgagtattcttcccagcctgaaagtctgc
ctggacctctccgctgaatatctgatactgagcgatgtgcagagaaaagtcttgtatgtg
atggagctgatgcagaaccaagaggagggcaaagcttacttcagctccatctccgagttc
ctccttacccacccagtcctaagctttggcatccaggcagtgagccgctgccggttaagg
cacactgaagtgctcccagcagaagaggaaaatgacaacttgagtgtagagggtgctcag
ggagctggggctgttgaatcagcagcaggcgtgctgataaaactcttctgtgtgcacacc
aaggccctacaggatgtgcagattagattccagcctcttcatagtcctgacatgagtgca
tccatgccttcccatggctctcatgaagaatttgcctttccagaccacatggctgatcta
agcacagaagggctgggatccgaaaaaggatcggtgcacggctctcaaccagacctgcgg
cgtattgctgatctgcctgtaccagcagacttcctttctctctcaaatgatgccaaacct
aagctgatgactccagatgcattcatgacaccaagtacatctcttcaacagatcgctgta
tctccaggcagcagcgtcagttccctgactgcagtcacagccatgagtagcacttctgtc
acggatgcctctatgcccaggccatcggaagacttgactgtgagccccaagatgcagctg
gacaccagcctcacactgagtagcagtagcagcagtctccagactagtcccaggagccat
tcagttcttatcccaggcctccctgacaagctaacaccaaaggcacctgttccagtcacg
ccaggaaacccctctctagcactggaactgcaggaggtggagcccttggtggtgccccag
gcttctcccacccgcgagcgctcgccagacgtcatttcctctgcttccacagccatgtcc
caagatatcccagagattgcttccgagaccttgcaacgcagctttgcggcagctccgtct
gggctccccgcggaggtgctggagcccagtcatcacgcagacagtatggcatccgctgcc
tcagccttgcatttgctgtctccgaggaaccggcacaattcagagcacagccaccactct
ttggacatgcctccagtggaggtggacagactgaatgctccgtcattactggagactgct
ttaactcaggaaaatgcatcttctgacagtgttgtgagtcagccgtggccagcagctcct
gacataaccagagaaaccaggaacagcatggcagacagcccaagggatgaggttgaagaa
aagcacaagagctcttcctatcatcgacacagctaccacctgctgcagcatgacagccag
gatgctagtgcagaacaaagtgaccatgatgatgaagttgcaagcttggcttctacatca
ggtggatttggtgccaaagcgtctacgcagaggctgcctgtgaaggactggaaagccaag
gcatcccctcgggcttccccaaagctaaagcggaagggcaagaaagatgacggggatgtg
aaccagtcgccaagatcatctaacaaccaggtgacaccagagttccaggatgagctgatg
tgcatattgaggagccaacagcgggagctctctgagctgcgtcagaaccagatggagctg
ctgcagagactcacggatcaccttgatgccattcagagctcccttatgggccatgtggag
agggtgattgactcccagcaggaacaggagcaaagaagactagaccgagcgctgacggaa
ggacagcagcgcaatgggcagctccaggagcatctgtctcagcagctctctcagtccctt
tccactgctgtgtgtaaccgtctggagaggaccattcgtgaggagatgaagaagactgta
ccccagtgcatttccaagagcatggaccctattgctggccagctaagtaacactattgct
gccaagctcactgctgttgaggggacactgaaagagagtatcaccaagctggtgaaatca
aagaaccttacagatactgttgtgagggcaacggccgacaccctgcaggggccgatccag
tcagcttacagggaagcgtttcagagcgtcgtgttgccggccttcgagaagagctgccag
tccatgttccagcaaatcaatgacaccttcaagcagggcacacaggaatatatccagcag
cttgagactcacttgaagaacaagaaggtacgagaacaggaggcccgggacccgctgctg
aatcagcttcgacagctcatcagcaccttccagagcaccaccgagcagctggcttccact
gtcgcagccagcgtccacgctgaggtgcagcatcagctgcatattatcgtgagcaacatg
caggagtctattttggcccaggtgcagagagtcattaaaggagaagtgagcctggctatg
aaggagcagcaagcagctgtcacctcgagcatcgtccaggcaatgcgctcggcggccggg
actccgatcccctctgctcacttggatttccagtctcagcaaactcacatccttcagctg
cttcagcagggacaactcaaccaagctttccagcaggctctaacagcagctgatctcaac
ctggtcctgtatgtctgtgagactgtggatactcagcaagtattcggacagcatccatgc
ccgctgtcccagccggtgctgctctctctcattcagcagctctcctcggatttgggtact
cgtacggaactgaagttgaattacttggaggaagcggtgatgcacctggaccacagcgac
cccatcacccgagaccacatggggtcagtcatgaaccaggtgcggcagaagctcttccag
ttcctccaggtggaaccccacaacacgctgagcaagcctgcccgtcgcctcatgatcatg
ctccagggcctggtcacccccggcatgacctag
DBGET
integrated database retrieval system
