Aptenodytes forsteri (emperor penguin): 109279815
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Entry
109279815 CDS
T08527
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
afor00536
]
109279815 (COL13A1)
Glycosaminoglycan binding proteins [BR:
afor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109279815 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
109279815
NCBI-ProteinID:
XP_019330467
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MLEEKSWKGVGEAAFDRGCVAPPRTGDGERCCRLPLLLGSGLPGVSLLSLVLSLLLYFRT
SDLQSRVSHLEADRPTQLPAWLSADQMETAILGRVDQLLDEKLKFHLPRHREVRDTHQRC
NCPAGPPGDKGAMGIPGRPGLKGQPGEKGAPGEAGMSIIGPRGPPGQPGTRGFPGFPGPI
GLDGKPGHPGQKGEMGAAGPRGQPGPSGQKGEKGQCAEYPHREYLSTTLAALRSNQILTL
KGEQGQAGIQGPPGPPGPPGPTGPAGPEGTPGQPGPVGPPGRAGEPGKPGRDGKGLPGPP
GPKGDPGIQGYPGRKGAPGMATAGMKGEPGTPGEKGDPGVPGRMGPPGLPGKRGQRGEKG
RAGDPGLPGLPGTKGEKGNAENALEGGKGEPGPPGLPGPPGPKGEAGDVGRPGAAGSRGE
KGEPGSPGDQGPMGPRGPKGEPGKDEMMDYDGNISEALQEIRTLALMGPPGLPGVAGPPG
PPGQKGEIGLPGPPGHDGEKGPRGKPGEMGPPGPHGLPGKDGPPGIKGEPGHIGVTGEKG
DKGEPGQAGSPGLDGPTGEKGERGDQGMPGPSGLPGPIGLPGLTGEKGEPGEHGDKGNPG
ESISGPPGPQGPPGPPGLQGLPGPKGEAGIDGMKGEKGAQGEKGDRGPLGLPGASGLDGR
PGPPGTPGPIGVSGPAGPKGERGSKGDPGVVGPMGPAGLPGLQGLPGDKGIRGERGKKGS
RGSKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNKGQTPWLIAKK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggagaagagctggaaaggtgtcggtgaagcagcttttgacagggggtgtgtg
gctccccccaggaccggcgacggggagcgatgctgccgtctccctctcctgctgggctcg
gggctgcccggcgtctccctgctttctctggtgctgagcctcctgctgtactttcggacc
tccgatctgcagtcccgggtgtcccacttggaagcagacagacccacacagctccctgcc
tggctctcagcagaccaaatggagacagctattttgggaagagttgaccaactgcttgac
gagaaattaaagttccacttgccgagacatcgagaagttcgagacacacaccagcgatgc
aactgcccggcaggcccacctggagacaaaggtgcaatggggatccctgggcggccggga
ctaaaagggcaacccggagagaagggtgctccaggagaagcgggcatgtctatcatcggg
cctcgcggtccacccggacagcctggaacaagaggttttcctggattcccgggccctatt
ggcttggatggcaaaccgggtcatcctggacagaagggggagatgggtgctgcaggtccc
aggggacaacctggaccctcaggacaaaaaggagaaaagggtcagtgtgcagagtaccca
cacagggaatacctaagtaccacccttgcagccctgcgctctaaccagatccttacatta
aagggtgaacaaggacaagcgggaatccaaggtcccccggggccccctggcccgccaggg
cccactggaccagctggacccgaaggaaccccaggacagcctgggccagttgggccgcct
ggcagagcaggagaacctgggaagcctggcagagacggaaagggcttacctgggcctcct
ggaccaaagggagaccctgggattcagggataccctggcagaaagggcgctcctgggatg
gccaccgcagggatgaagggcgagcctgggactccaggagaaaagggagatcctggagtc
ccagggaggatgggccccccaggtttgccagggaagagggggcagcggggtgagaaggga
cgagctggtgaccctgggcttcctggactccctggcacgaagggagagaaaggaaacgct
gagaatgccctggagggaggtaaaggagaacctggccctccaggtctgcctgggccccct
ggaccaaagggagaagctggtgatgttggccggcctggtgctgcagggtcacggggagaa
aagggggaacctggttcaccgggagaccagggacccatgggcccaaggggccccaaagga
gagcctgggaaggatgaaatgatggactatgatggtaacatcagtgaagctctccaggaa
atacgaactttggccttgatgggacctccaggacttccaggtgtggctggacctccaggg
ccaccaggacagaagggtgaaattggcttgccaggtcctccaggccatgatggagaaaag
ggaccacgcggcaagcctggagaaatgggcccccctggccctcatggactgccaggaaag
gatggaccacctggaataaagggagagccaggccatatcggggttacaggagaaaagggc
gataaaggagagccaggacaagccggctcaccaggtcttgatggccccactggagagaaa
ggtgaacgaggtgaccaagggatgccaggaccatcaggattgccgggtcccattggactt
ccaggactgacaggagagaagggcgagcctggggagcatggagacaaaggaaatccggga
gaatcgatatctggcccccctggaccccaaggcccaccaggacctccaggtcttcagggc
ctcccaggaccgaagggggaagcagggattgatggaatgaaaggagagaagggtgcccag
ggtgaaaaaggagacagagggccactgggattacctggtgcttcaggtttagacggcagg
cctggaccaccgggtactccaggaccaattggggtttcgggaccagcaggaccaaaagga
gaaaggggcagtaaaggagatcctggagttgtaggaccaatggggccggcaggacttcct
ggtttacaaggtctacctggtgacaaaggaatccggggggagaggggcaagaaaggctct
agagggtctaaaggggataagggagaccaaggagcgcctggattagatgcaccctgtccg
ttgggagaagacggccttccagttcaaggctgctggaataagggtcaaactccttggctg
atagccaaaaagtga
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