Acidithiobacillus ferriphilus: K1Y48_04300
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Entry
K1Y48_04300 CDS
T07843
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
afp
Acidithiobacillus ferriphilus
Brite
KEGG Orthology (KO) [BR:
afp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afp03032
]
K1Y48_04300
03036 Chromosome and associated proteins [BR:
afp03036
]
K1Y48_04300
03400 DNA repair and recombination proteins [BR:
afp03400
]
K1Y48_04300
DNA replication proteins [BR:
afp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K1Y48_04300
Chromosome and associated proteins [BR:
afp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K1Y48_04300
DNA repair and recombination proteins [BR:
afp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K1Y48_04300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
UEP59876
LinkDB
All DBs
Position
complement(862857..863102)
Genome browser
AA seq
81 aa
AA seq
DB search
MATITKTAFVADLAETHHINRQAAQEAVNAVVATMPQALIDGHGIKLPGLGTSGESLDIP
AKRTVQFKVASDLQRQIRQPE
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatcaccaaaacagcctttgttgccgatctggccgaaacgcaccacataaac
cgacaggccgctcaggaagccgtaaacgccgttgtggccaccatgccgcaggccctgatc
gacggtcacggcatcaaactgccgggattgggtacttccggggaaagcctcgatatcccg
gctaaacgcactgttcagtttaaagtggccagcgatctccaacgacagatccgacagccg
gaatga
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