Acidithiobacillus ferriphilus: K1Y48_04835
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Entry
K1Y48_04835 CDS
T07843
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
afp
Acidithiobacillus ferriphilus
Brite
KEGG Orthology (KO) [BR:
afp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afp03032
]
K1Y48_04835 (gyrB)
03400 DNA repair and recombination proteins [BR:
afp03400
]
K1Y48_04835 (gyrB)
Enzymes [BR:
afp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K1Y48_04835 (gyrB)
DNA replication proteins [BR:
afp03032
]
Prokaryotic type
DNA Topoisomerases
K1Y48_04835 (gyrB)
DNA repair and recombination proteins [BR:
afp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K1Y48_04835 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
UEP59971
LinkDB
All DBs
Position
complement(977151..979553)
Genome browser
AA seq
800 aa
AA seq
DB search
MTGIYDSTSIQVLKGLEAVRKRPGMYIGDTDDGSGLHHMVFEVVDNAIDEALGGYCDAIV
VTIHDDESVSVSDNGRGIPVDIHAEEGRSAVEVIMTVLHAGGKFNDNAYKVSGGLHGVGV
SVVNALSETLQLRIFRDGYVWTQEYHDGEPQAPVARGEASRKHGSTIRFKPSPQVFADTH
FHFEIIAKRLRELAFLNSGVHITLLDERGGREEVFHYEGGIRAFVEHLNRSKTAIHPTVI
TLNGERDGIVVEAALQWNEGYSEAVLCFTNNIPQTDGGTHLAGFRGALTRTLNQYMEREG
IIAKAKVVVSGEDTREGLTAVLSVKVPDPKFSSQTKEKLVSSEVKPIVESSMSEALTIFL
DEHPKEAQAIAAKIVEAARAREAARRARELTRRKGALDIANLPGKLADCQEKDPAKCEIY
LVEGDSAGGSAKQGRDRRHQAILPLKGKILNVERARFDKMLSSDEIGTLITALGTGIGAG
DFDVAKLRYHRVIIMTDADVDGSHIRTLLLTFFYRQMPELVARGHIYIAQPPLYKVKKGK
DERYIKDDIELAAYLREIAMQGAQFRPAADAEPVTEEQLAGMMRQYQNIEALVQRLERRY
PGTLLWALATLPPVVTESADSAAWDDFARRLRAALELNALPAEHYTVERVGEAEALRLVV
RREHHGSQELRFFDQDFFAGGEYRHLADYARVIEGNIRAGARMERGERGLTVSRFRAAMD
WLMADARRGIEIQRYKGLGEMNPEQLWETTMNAENRRLVRVDVEDSIAADEVFSMLMGDA
VEPRRRFIEDNARFVSRLDI
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaatatacgattctaccagtatccaggtattgaaagggctggaagcagtacgc
aaacgccccggcatgtatatcggtgataccgatgatggcagcggtctgcaccacatggtt
tttgaggtggtggacaacgccatcgacgaggcgctcggcggttattgcgacgccatcgtt
gttaccatccatgatgacgaatcggtcagcgtcagcgataacggtcgcggcattcctgtc
gacattcacgccgaagaggggcggtctgctgtcgaagtcatcatgaccgtactgcatgcc
ggtggtaaatttaatgacaatgcctacaaggtttccggcggtctgcacggggtcggtgtc
tcggtagtgaacgccctttcagaaacgctccagttgcgtatattccgcgatggctatgtc
tggacccaggaatatcatgatggcgaaccccaggcacccgttgcccgaggtgaggcgtca
cgcaagcatggcagtaccatccgcttcaaaccctcgcctcaggtttttgccgatacgcat
ttccacttcgagattatcgctaagcgcttgcgcgaactggcttttctcaattccggcgtg
cacatcaccttgctggatgaacggggcggacgggaagaagttttccattacgaaggcggt
atccgcgcctttgtggagcatctcaaccgcagcaaaaccgccattcatcccactgtgatc
acccttaacggcgagcgcgacggtattgtcgttgaagccgccctgcaatggaatgaaggc
tatagcgaggcggtgctttgcttcaccaacaatattccccaaaccgatgggggcacacat
ctggcgggctttcgcggcgcgctgacccgtactctgaatcaatatatggaacgggaaggc
atcatcgccaaggctaaggtggtggtgagtggcgaagatacgcgtgaaggcctgacagca
gtgctttccgtcaaggtaccggatcccaaattttcttcgcagaccaaggaaaagctggtt
tccagcgaggtcaagccgatcgtggagtcttccatgtccgaggcgctgacgatatttttg
gatgagcaccccaaagaggcgcaggcgattgccgccaaaattgtcgaagcggcacgggcg
cgggaagccgctcgccgggcaagggaactgacgcgccgcaagggtgcgctggatatcgcc
aacctccccggcaaactggccgactgccaggagaaagatccagccaagtgcgaaatttat
ctggtggagggtgattccgccggcggctccgccaaacagggccgtgatcgtcggcatcag
gctatcctgcccttgaagggtaaaatcctcaatgtggaacgggcgcgttttgataaaatg
ctttcgtcggatgagatcggtaccctcattacggccttgggcaccggtattggcgctggg
gattttgatgtggccaagttgcgttatcaccgcgtcatcatcatgaccgatgcggatgtc
gacggcagccatatccgcaccctgctgctgactttcttttaccggcagatgcccgaactg
gtggcgcgcggccatatttatatcgcccagccacctctctacaaggtcaagaaaggcaag
gatgagcgctatatcaaggacgacatcgaattggccgcctacctgcgcgaaattgctatg
cagggcgcccaattccgtcctgcggcggatgctgagccggtaactgaggagcaactggcc
ggcatgatgcgtcaataccagaatatcgaggctttggtgcagcgcttggagcggcgctat
cccggtaccctgctttgggcgctggccacgttgccgcctgttgttacggagtcggcggat
agcgccgcctgggacgatttcgcgcgacggctccgcgcggcattggagctcaacgccctg
cccgccgaacattacacggtggagcgggtgggcgaagcagaggccttgcgcctggtggtc
cgccgcgaacatcacggcagtcaggaactacgtttctttgatcaggatttctttgccggt
ggtgaataccggcatttggcggattatgcgcgggtgattgaaggtaatatccgtgccggc
gcgcggatggaacgcggcgagcgagggcttaccgtcagccgtttccgtgcggctatggac
tggcttatggctgacgcccgtcggggtatcgagattcagcgctacaagggcctgggtgaa
atgaatccggaacagctttgggagaccaccatgaacgccgaaaaccggcgtctggtgcgg
gtggatgtggaagactccatcgctgccgacgaggtcttttccatgctcatgggcgatgcc
gtggaaccgcgtcgccgctttattgaggataacgcacgtttcgtatcgcgactcgatatc
tga
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