Acidithiobacillus ferriphilus: K1Y48_05405
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Entry
K1Y48_05405 CDS
T07843
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
afp
Acidithiobacillus ferriphilus
Pathway
afp02020
Two-component system
afp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
afp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K1Y48_05405
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K1Y48_05405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afp03021
]
K1Y48_05405
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
afp02035
]
K1Y48_05405
Transcription machinery [BR:
afp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K1Y48_05405
Bacterial motility proteins [BR:
afp02035
]
Flagellar system
Flagellar assembly proteins
Stator
K1Y48_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_r3
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
UEP60072
LinkDB
All DBs
Position
1093843..1094571
Genome browser
AA seq
242 aa
AA seq
DB search
MGSAPITLCEQDTNAYLREYYPLILRLAQRIQDGLPSRNAYDDLVQAGMLAAWACAGHHQ
RFAAPQEFVKLLAVRIRGAMLDLLREEDWAPRRLRKKNKTLEIGAAHCIQHLQRYPNDQE
LAEAMGWSVHELHQHWSEIGRAAPLYLEDVLPAHSELMDDTAQPHHRAERDEAKTFLTEA
IAALSEEERTALSLYVLEELTLEDVAYVMGFKSKNTALKWVTQGITKCRAFLLAQGLDAE
SV
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
ttgggttcagcaccgataacactctgcgagcaggacaccaatgcctacctgcgtgaatat
tatccgctgatcctacgtctggctcaacggattcaggacggtctgccctcgcgtaacgca
tacgatgacctcgtgcaggcaggtatgctggccgcatgggcatgcgcaggtcaccatcaa
cgattcgctgcgccgcaagaatttgtcaaactgctggctgtgcgcattcgcggcgccatg
ttagacctgctgcgggaagaagattgggcaccacgtcgactgcgaaaaaaaaataaaacg
ctggagatcggagcggcccactgcattcaacacctacagcgctatcctaatgaccaggag
ttggccgaagctatgggatggtcggtccatgaactccatcagcattggagtgaaatcgga
cgcgccgcccccctatatttggaggatgtgcttcctgcgcattcggaactcatggacgac
actgcgcagccacatcaccgcgcagagcgcgatgaggctaaaacatttttaacggaggct
atcgctgccttatcggaggaagagcgtaccgctctttccctatacgtcttggaagaactc
accttggaagatgttgcgtatgtgatgggattcaagagcaagaatactgctctaaagtgg
gttactcaaggaatcaccaaatgtcgcgcttttttgttggcgcagggtcttgatgccgaa
tcagtctag
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integrated database retrieval system
