Acidithiobacillus ferriphilus: K1Y48_07145
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Entry
K1Y48_07145 CDS
T07843
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
afp
Acidithiobacillus ferriphilus
Pathway
afp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
afp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K1Y48_07145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
afp02022
]
K1Y48_07145
02035 Bacterial motility proteins [BR:
afp02035
]
K1Y48_07145
Two-component system [BR:
afp02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
K1Y48_07145
Bacterial motility proteins [BR:
afp02035
]
Pilus system
Twitching motility proteins
K1Y48_07145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
AAA_5
HTH_8
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UEP58129
LinkDB
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Position
1420670..1422028
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AA seq
452 aa
AA seq
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MMADFSVLPPALIVDDEPNIVELLGITLQGMGIAVTGAYSLAEAFARLAEGAPSLCLSDL
RLPDGSGIDLVRRLHALHPRVPVAVITAYSSADGAVEAMQAGAFDYMAKPIELTRLRRLI
SQAVDLARLSPMGSDGTQRLVGDSPVMRRLRDDIRRVARSNAPVHITGESGTGKELAARA
IHASGVRHDKPFVAVNCGAIPEGLVESELFGAEKGAYSGAVQRREGLFVAANGGTIFLDE
VGELPMMVQVKLLRAIQERSIRPLGASREIPLDLRFISATHRDLQEMVVAGSFRRDLLYR
LDVVRLHMPPLREHPEDIPQLAEVILQRIGGAQPGVPTRLSAGTLARLGGYAFPGNVREL
ENLLERRIALQRDDILPEEELTSSGRVAPENSVLAAVSASAAAAGLDTAEAALLRQMLGQ
AGGDRHHAADLLGVSVQSLELRLSRLSLEEIA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgatttttccgtattgccacctgccctgatcgtggatgatgagccgaatatc
gttgaattgctgggcattacgttgcaaggtatgggaatcgctgtcaccggtgcctattcc
ctcgcagaggccttcgcccgcctcgccgaaggtgccccctctttatgcttgagcgatctg
cgtttgccggatggttcgggtattgatctggtacgtcgtctacacgcgttgcatccgcga
gtaccggtcgccgtgattacggcctactcttccgccgatggcgccgtcgaggcgatgcag
gcaggggcctttgattacatggctaagcccatcgaacttacgcgtctgcggcgactgata
tcgcaagccgttgatctcgctcgcctgtcaccgatgggttcggacggtacgcaaaggttg
gtgggcgattccccggtcatgcggcgcttgcgcgacgatatccgccgtgtcgcgcgaagt
aacgcgccggtacatattaccggtgagtctggtacgggtaaggagttggcagcgcgtgcg
atacacgcctcgggggtccgtcacgacaagcctttcgtggccgtcaactgcggcgccatt
cccgagggactggtagaaagcgagctctttggtgccgaaaagggggcttactccggtgct
gtacagcgccgcgaggggctctttgtggcggccaatggcggtaccattttcctggatgag
gtcggtgagctaccgatgatggtgcaggttaagctcctgcgcgccattcaggagcgcagc
attcgtccattgggtgcatcgcgggaaattcccctggatctgcgttttatctccgcaacc
caccgtgatttgcaagagatggttgttgccggtagctttcgtcgggatctcctgtatcga
ttggatgtcgtgcgacttcatatgcctcccttgcgtgagcatccggaggatattcctcag
ttggcagaggtgattctgcagcgtatcgggggcgcgcagcctggtgtgccgacgcggctg
tctgcggggactcttgcgcgactgggtggttacgccttccccggcaatgtccgcgaactg
gaaaatttgctggagcgtcgtatcgcgttacagcgggacgatattctacctgaagaagaa
cttacgtcctctggccgcgtggcgccagaaaacagcgtacttgccgctgtatcggcaagc
gctgccgcggctggtttagacacggccgaggcagcattactgcgccagatgctggggcag
gccgggggagaccggcatcatgccgcagatctgctgggtgtcagtgtgcagtctctggaa
ctgagactcagcagattgtctctggaagaaatcgcatga
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