KEGG   Acidithiobacillus ferriphilus: K1Y48_08625
Entry
K1Y48_08625       CDS       T07843                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
afp  Acidithiobacillus ferriphilus
Pathway
afp03030  DNA replication
afp03430  Mismatch repair
afp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:afp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K1Y48_08625 (dnaQ)
   03430 Mismatch repair
    K1Y48_08625 (dnaQ)
   03440 Homologous recombination
    K1Y48_08625 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afp03032]
    K1Y48_08625 (dnaQ)
   03400 DNA repair and recombination proteins [BR:afp03400]
    K1Y48_08625 (dnaQ)
Enzymes [BR:afp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K1Y48_08625 (dnaQ)
DNA replication proteins [BR:afp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     K1Y48_08625 (dnaQ)
DNA repair and recombination proteins [BR:afp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     K1Y48_08625 (dnaQ)
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 RNase_H_2 MethyTransf_Reg NPC1_N
Other DBs
NCBI-ProteinID: UEP58396
LinkDB
Position
1709444..1710172
AA seq 242 aa
MAVRQVVLDTETTGIDWKQGHRVIEIGAVELIDRRVTGVHYQQYLNPQRSSDPEALRVHG
LTAEFLQDKPVFAEVADAFLDFLGDAELIIHNAPFDLGFLNHELQQAKKAPLRQAVMDTL
VDARRRHPGQKNDLNSLCRRYSVDNSRRDLHGALLDCEILAEVYLAMTGGQVDMMGLIST
IALPSEVPAVSPPSSAGVAPLVGPVSLQRKTALRVIRASSAEVAAHQQYLQNMGSTALWH
DE
NT seq 729 nt   +upstreamnt  +downstreamnt
atggctgtgaggcaggtggtgctggatacggaaaccacgggcatcgactggaagcaaggg
catcgggtaattgaaatcggggccgtggagctgatcgaccggcgggtgacgggggtgcat
taccagcaatatctcaatccgcagcgcagcagtgatcccgaggccttgcgggtgcatgga
ctgaccgccgagtttttgcaggataagccggttttcgctgaggtcgcggacgcttttctg
gacttcttgggtgacgcggaactcattattcacaacgcgccttttgatctgggttttttg
aatcatgaattgcaacaggcgaaaaaagcaccgttgcggcaggcggtaatggataccctg
gtggatgcgcgccgccgccaccccggccagaaaaatgatttgaacagtttgtgccgacgc
tatagtgtggacaacagtcgtcgtgatctgcacggggctttgctggactgcgagatactc
gcggaagtctacctggcgatgaccggtgggcaggtggatatgatgggccttataagcacc
atcgcgctgccgtcagaggttccggcagtctcgccgcctagctctgctggcgtcgcgccg
ctggttggcccggtgtctttgcagcgcaagaccgcactgcgggtaattcgtgccagcagt
gcggaggtcgccgcacatcagcaatatctgcaaaatatgggatcgaccgctttatggcat
gatgagtga

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