Acidithiobacillus ferriphilus: K1Y48_10355
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Entry
K1Y48_10355 CDS
T07843
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
afp
Acidithiobacillus ferriphilus
Pathway
afp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1Y48_10355 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afp03019
]
K1Y48_10355 (pcnB)
Enzymes [BR:
afp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
K1Y48_10355 (pcnB)
Messenger RNA biogenesis [BR:
afp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K1Y48_10355 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
UEP58705
LinkDB
All DBs
Position
complement(2067799..2069277)
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AA seq
492 aa
AA seq
DB search
MVSIKDFITKQLNLPDSAVETVAAPPPLSPGIPGARVTPRNEHSVSRRQISEGALQVLNG
LHRAGFQAYLVGGSVRDLLLGREPKDFDVATDAHPEQVRKLFRRNARLIGRRFILVHVQF
GHEIIEVATFRGGANGKANEASERSETGRILADNVYGSLEEDARRRDFTANALYYNIADR
SILDFSTGMEDLQAGRLRVIGDPEQRYREDPVRMLRAVRFAAKLGFIMDTAAQAPIAACR
ERLQEVPSARLFEETLKLFLNGNAQTSFEHLRQQGLFAALFPQVDVLLDHAEYSAARTLL
QGALGGTDTRVRDGKSVTPAFLFAALLWPALQEQCRLLEQQGKPATVALQQAASDVLQEC
VGRVSVPRRFALPMREIWDLQARFMRRGGRRPHALLAHPRFRAAFDFLSLRSQSGEISAT
LVEWWEQFQTADHDGRRILIERARLEETGQEAALGPLPATSRRRPRRRRRRGNRPGQGGA
DDSHDDGQTDSD
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
ttggtatccataaaagactttattaccaagcagttaaacctgccagattctgccgtcgaa
acggtggcggctcccccgccgctatcacccggcatccccggtgcacgggtaacgccacgt
aacgagcacagcgtttcgcggcgtcagatcagcgaaggcgccttgcaggtcctcaatggt
ctgcatcgcgccggctttcaggcctatctggtcggcggcagtgtccgtgatctgctgctg
ggacgggagcctaaggatttcgacgtcgcaacggacgcgcacccggagcaggtccgcaaa
ctgtttcggcgcaacgcccgcctcattggtcgacgcttcatcttggtgcacgtacagttt
ggtcacgagatcatcgaggtagccactttccgcggcggcgcgaacggcaaggcaaacgag
gccagtgagcgcagcgaaacagggcgcatattggcagataacgtctatggttcacttgag
gaagacgcccggcgccgggatttcaccgccaacgcactctattacaacatcgctgaccgc
agcattctggatttctccacaggcatggaagatttgcaagccggtcggctgcgcgtcatt
ggtgatccagagcagcgttaccgggaagatccggtgcggatgctgcgggccgttcgcttt
gctgccaagctgggattcatcatggatacagccgcccaggcgcccatagcggcctgccgc
gagcgcctgcaggaggtgccctcggcgcggctgtttgaagaaacactaaaactttttttg
aatggtaacgcgcagaccagtttcgaacacttgcgccagcaggggctatttgccgccttg
tttccgcaggtggacgtgctcctcgaccatgcggaatacagcgcggcacgtacgttgttg
caaggcgcgctggggggtaccgatacgcgggtacgtgacggcaagtcggtaacccccgca
tttctctttgccgcattgctctggcccgccttgcaagagcaatgccggttgctcgaacaa
cagggcaaacctgcaacggtcgccctgcagcaagccgccagcgacgtgctgcaggaatgc
gttgggcgtgtttctgtccctcgtcgcttcgctctgcctatgcgcgaaatatgggatttg
caggcgcgtttcatgcggcgcggtggacgtcgccctcacgcgctgctcgcccatccgcgc
tttcgtgcagcctttgatttcctgagtctgcgcagtcagagcggcgaaatatcggctacc
ttggtggaatggtgggaacaattccagaccgcagatcatgatggtcgacgtatcctcatc
gaacgggctcgcctcgaagaaaccggacaggaagcggcactggggccactcccagcaaca
tcacgtcgccgtccccggcgacggcgacggcgcggtaatcgtcctggtcagggcggcgcg
gatgacagccatgacgacggacagaccgacagcgattaa
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