Acidithiobacillus ferriphilus: K1Y48_11085
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Entry
K1Y48_11085 CDS
T07843
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
afp
Acidithiobacillus ferriphilus
Pathway
afp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K1Y48_11085 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afp03400
]
K1Y48_11085 (recO)
DNA repair and recombination proteins [BR:
afp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K1Y48_11085 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K1Y48_11085 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7575
Planc_extracel
Motif
Other DBs
NCBI-ProteinID:
UEP58829
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All DBs
Position
2219222..2219968
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AA seq
248 aa
AA seq
DB search
MTTEAGDRAWVLHRYPYGDTSLVVELFTQTQGRLGVLAKGARRARSPLARIEAGRPLWVR
WLGRGELPVLAQAEELEPALPLDSLQSLSLFYINELLLRLTQRGDPFPALFLVYEETIRV
LRGEPGAGWYLRRFERRLLENLGWAPDLERCAKCGRSLDPTLSEHWFYQAERGVLCPAHA
PDATVVTLEAAALAWLQGAMQTRIVGGWGPSLRHCLEQELQVHLGGRPLESRRLLAAYLR
RTRLTSTT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgaggccggtgatcgcgcctgggtcttgcatcgctacccttatggggatacc
agtctggtagtcgaactgtttacgcagacacagggtcggctgggggtcttggccaaaggt
gctcggcgcgcccgctctccgctggcgcggattgaggcggggcgccccttatgggtgcgt
tggctggggcggggtgagttaccggtgctggcgcaggcggaagagcttgagccagcgctg
ccgctcgatagcttgcaaagcctcagcctcttttacatcaacgagttgctgttaagactc
acccagcgcggggatccctttcctgcactctttctggtgtatgaagaaacgatcagggta
ttacgcggtgaacccggtgcgggttggtatttgcgacgcttcgagcggcgcttgctggaa
aacctgggctgggcacccgacctggagcgctgcgcgaagtgtggccgatctcttgatcct
acgctttcagagcactggttttaccaggcagaacgtggggtgctttgtccggcacatgcg
cccgatgccacggtggtgaccttggaggcggccgctttggcttggttgcagggggcgatg
cagacacgaattgtgggaggctggggtccctctttgcggcactgcctggagcaggagtta
caagtccatctgggtgggcgcccgctggagagccgccgcctccttgcggcgtacttgcgc
agaacacggctcacgtcgacgacatga
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