Acidithiobacillus ferriphilus: K1Y48_11370
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Entry
K1Y48_11370 CDS
T07843
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
afp
Acidithiobacillus ferriphilus
Pathway
afp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K1Y48_11370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afp03000
]
K1Y48_11370
03400 DNA repair and recombination proteins [BR:
afp03400
]
K1Y48_11370
Enzymes [BR:
afp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
K1Y48_11370
Transcription factors [BR:
afp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
K1Y48_11370
DNA repair and recombination proteins [BR:
afp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K1Y48_11370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
TruB_C
TetR_N
HTH_23
HTH_3
RecR_HhH
Sigma70_r4
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UEP58876
LinkDB
All DBs
Position
complement(2277345..2278814)
Genome browser
AA seq
489 aa
AA seq
DB search
MNTSDLNREACYRAVLAKDARFDGKFYTAVLSTGIYCRPICPARPPKLENCLFVPSAAIA
RQLGFRACLRCRPELAGTEPFAEGSALMVSRALQQMSDDGAWNGTSLEEVAAQLGVSERH
LRRLFGRVLGSPPTALAQMQRILLAKKLIAETGLSMTDVALAAGFGSVRRFNAVMQRHCG
CAPGTLRHTSASKSDMAAGITLKLPYTPPYDWTALLEFLAGRAIPGVEAVQSGQYWRAFE
LEGVQGLVEVHPDPVADQLLATIHATKIPPVGVIVARLRRLFDLDTEIIRIDQHLSTDPL
MASRVRARPGLRVPGAWDLFELTVRAILGQQISVAAATTLSGRLVAALGESLTEDMVRLS
NGTGISRIFPTPAAVMAADLRSIGLTRAREKALQTLAVAMQKDRLAFSAHPLDSIIKNLC
ELPGIGPWTAHYIAMRGYRDPDAFPHSDLGLLRALETESGRPSPAEMLMLAEAWRPWRAY
AAMRLWAQP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatcggaccttaatcgcgaagcgtgctaccgcgccgtcctggcaaaagatgcg
cggtttgacggcaagttctacacggcggtgttatccacgggcatctattgtcgtccgata
tgtcccgcacgaccccccaagctggaaaactgtctctttgtacccagcgctgcgatagcc
cggcagttgggctttcgagcctgtttgcgttgccgcccggagttggcgggaaccgaaccc
ttcgcagagggcagcgccctgatggtttctcgggccttgcagcagatgagtgatgacggc
gcttggaatggcactagtttggaggaggtggctgcgcaattaggtgtcagcgaacggcat
ttgcggcgactgtttgggcgtgtgctcggcagcccgccgacggctctggcgcagatgcag
cgcattctgctggccaaaaaactgattgcagaaaccggactttccatgaccgatgtcgca
cttgccgcaggatttggcagcgtccgccgtttcaatgcggtcatgcagcgccattgtggg
tgtgcacccggcacactgcgccatacttccgcttcgaagagcgacatggctgcgggtatc
accttgaagctgccttataccccgccttatgactggacggcactgctggaatttctggca
ggtcgtgccatccctggggtggaggccgtgcagtccggtcaatattggcgcgcctttgag
ctagagggggtacagggccttgtcgaagtccatcctgatccggtggccgatcagcttctg
gcaaccatacacgcaacgaaaattccccccgtaggcgtcatcgtggcgcgattgcgccgc
ctgtttgacctggatacggaaatcattaggatcgaccagcatctttccacagatccgctt
atggcttcacgcgtcagggcgaggccgggattgcgtgtcccaggcgcatgggatttgttc
gaactcaccgtgcgcgcgatattgggtcagcaaattagcgtggccgcggcgaccacgcta
tcgggtcggctggttgccgcccttggagaatcactcacagaggatatggtgcgactttca
aacggcacgggaatctccaggatattcccgacacccgccgccgtcatggccgccgatctg
cgctctatcggcctaacccgtgccagagaaaaggcgctgcagactctggctgtggccatg
caaaaggatcgcctggctttttcggcgcatcccctcgacagcatcatcaaaaacctctgc
gaactgccgggtatcggcccgtggacggcgcactacatcgccatgcgcggttatcgtgat
ccggacgccttcccccattcagacttgggattgctgcgtgcgctggaaacggagagtggg
cgccccagccccgcagaaatgctgatgctcgccgaagcatggaggccctggcgggcctat
gcggccatgcgtttgtgggcgcagccctaa
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