Alcaligenes faecalis JQ135: AFA_00010
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Entry
AFA_00010 CDS
T05446
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
afq
Alcaligenes faecalis JQ135
Pathway
afq03030
DNA replication
afq03430
Mismatch repair
afq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFA_00010
03430 Mismatch repair
AFA_00010
03440 Homologous recombination
AFA_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afq03032
]
AFA_00010
03400 DNA repair and recombination proteins [BR:
afq03400
]
AFA_00010
Enzymes [BR:
afq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFA_00010
DNA replication proteins [BR:
afq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFA_00010
DNA repair and recombination proteins [BR:
afq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFA_00010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ASR87971
LinkDB
All DBs
Position
1481..2596
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AA seq
371 aa
AA seq
DB search
MTMQLVQATRDALLKPLSTVVGIVERRHTLPILANILLRKNGSDVSFLATDLEVQITTNA
DFGVGEDNAATTVAARKLLDILKALPDFGDVRLGLDSGKLTIQSGKSRFQLQTLDAADFP
VLNLPEQWDVSLSMPQRTLKHLFNTVHFAMAQQDIRYYLNGMLLVFEPGLVRTVTTDGHR
LAHNATAIDGVQERHDIIVPRKTVLEMQRLLGDTDDLVNIDVSSRQIRFRFGDVELVSKL
VEGKFPDFARVIPSNYTRHFDVSREVLQGSLQRAAILTTDKLRGVRLQLSQNQLKISASN
AEQEEAVEELDIDYEHESLDVGFNVSYLLDVLASIKDETVRWSVQPDANASVLMTLPEQE
DFKYVVMPMRI
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcaactcgttcaagctacccgcgacgcattgctaaagcccttatccacagta
gttggcattgtggagcgccgccatactttgccgattctggccaacatcctgctgcgtaaa
aacggctctgatgtctctttcctggcaaccgacctggaagtgcagatcaccaccaatgcc
gactttggcgtgggtgaggacaatgcagccaccacggtggcggcccgcaagctgctcgac
attctgaaagccctgcccgactttggtgatgtacgcctgggcctggacagcggcaagctg
accatccagtccggcaagagccgctttcagttgcagaccttggatgcggcggattttcca
gtgctgaacctgcccgagcaatgggacgtgtcgctgagcatgcctcagcgcaccttgaag
cacctgttcaacacggtgcactttgccatggcccagcaagacattcgttactacctgaac
ggcatgttgctggtgtttgaacccggtcttgtacgtacggttaccaccgacggccaccgc
ctggctcataatgccaccgcaattgatggcgtgcaggagcgccacgacatcatcgtgccg
cgcaagaccgtgctggaaatgcagcgtctgctgggcgataccgacgatctggtcaatatt
gatgtgtccagccgtcagatccgtttccgttttggcgatgtggagctggtctccaaactg
gttgaaggcaaattccccgactttgcgcgtgtgattccttccaactacacccgccacttt
gatgtcagccgtgaagtgttgcaaggcagcctgcaacgtgctgccattttgaccacggac
aaactgcgtggcgtgcgactgcaactgtcgcaaaaccagctcaagatctccgcttccaat
gccgagcaggaagaagctgttgaagagctggatatcgattacgaacacgaaagtctggac
gttggctttaacgtcagctacttgctcgatgtgttggccagcatcaaggatgaaacagtc
cgctggtctgtgcagcctgatgccaacgcctctgtgttgatgacgctgcccgagcaagaa
gacttcaagtacgtggtcatgccgatgcgcatctaa
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