Alcaligenes faecalis JQ135: AFA_01260
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Entry
AFA_01260 CDS
T05446
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
afq
Alcaligenes faecalis JQ135
Pathway
afq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFA_01260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afq03400
]
AFA_01260
Enzymes [BR:
afq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AFA_01260
DNA repair and recombination proteins [BR:
afq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFA_01260
Prokaryotic type
AFA_01260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASR88197
UniProt:
A0AB33CWZ8
LinkDB
All DBs
Position
complement(279536..280339)
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AA seq
267 aa
AA seq
DB search
MQTMARSSSQAPAAQLSLIGEEILSGNLLTENILTQVARLPSDWRATLDRPELQDILAAL
AKWLDKECQDGAAIYPAAPFRALELLPLQKVSVVILGQDPYHGPNQAQGLSFSVPDTCPA
PPSLRNIFKELELEYPDTVLPSSHDLSNWGRQGVLLLNTSLTVEDGLPASHAKKGWEQIT
DSLLMNLAQQTTRPIVYMLWGAHAQAKEALIQQHSQRPYLILKANHPSPLAARRPPVPFI
GCGHFHQANDWLKEQGVTPIQWFATGA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcagactatggcacgatcatcttctcaagctcctgcggcacagctcagcctgattggc
gaggaaatcctctccggcaatctcctgaccgagaacatcctgactcaagttgcccgcctt
cccagcgactggcgagccacattggatcgcccggagctgcaagacatattggcggctctg
gccaagtggctggacaaagagtgccaggatggcgccgctatttacccggccgcccctttc
cgtgcactggagctactgccattacaaaaagtcagtgtggtgattctgggccaggatcct
tatcacggccccaatcaagcacagggcctgtcattttctgtgcccgacacctgcccggcc
ccacccagtctgcgcaatatctttaaagagctggaactggaatatcccgacaccgtgtta
cctagtagtcatgatctgagcaactggggccgacaaggtgtcttgctattgaatacatcg
ctcactgtagaagatggtttgcctgcctctcacgccaagaaaggttgggagcaaattaca
gactccctactgatgaacctggctcagcaaactacgcgccctattgtttatatgttgtgg
ggtgcgcacgctcaggccaaagaggccttgattcagcagcactctcaacgtccctatctg
attttgaaggccaatcacccttcccccttggctgcgcgccggccccctgtgccttttatt
ggctgcggtcatttccaccaagccaatgactggctcaaagagcagggggtcacccccatt
caatggtttgccactggcgcttaa
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