Alcaligenes faecalis JQ135: AFA_02165 Help Entry AFA_02165         CDS       T05446                                  Name (GenBank) deoxyribonuclease HsdR   KO K01153   type I restriction enzyme, R subunit [EC:3.1.21.3] Organism afq  Alcaligenes faecalis JQ135 Brite KEGG Orthology (KO) [BR:afq00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02048 Prokaryotic defense system [BR:afq02048]     AFA_02165 Enzymes [BR:afq01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters     3.1.21.3  type I site-specific deoxyribonuclease      AFA_02165 Prokaryotic defense system [BR:afq02048]  Restriction and modification system (R-M system)   Type I R-M system    AFA_02165 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SWI2_SNF2 HSDR_N ResIII T1R_D3-like T1RH-like_C Spore_YunB DUF2797 HSDR_N_2 Motif Other DBs NCBI-ProteinID:  ASR88358 UniProt:  A0AB33CNU4 LinkDB All DBs Position 476712..479822 Genome browser AA seq 1036 aa AA seqDB search MFQDEIQKVEQPAIELLQRLGWTYVPGTLLTPDAPTQYGQKAERAYYRDVVLANRLERAI QRLNPWLSEENLRKVLRDITHPIHAGLMEYNQAFWQMLVNYVSVEQDLGKGRKGQTVKII DFDTPDNNDFLCTTQFKIEGPNQKIIPDIVCFVNGLPLAVIECKSPYIADAVAQGIDQLH RYANLREPSAEEGAQKLFWYNQLMVSTCRDQAKVGTISSGMSHYADWKDAYPLTVGQVRD LLEAPIADDTLSTQFRDMSAAPYLLTTACAAERVHSAPAVITAQECLLAGMFYRSHFLDI IQNFVIYEPIDGRLIKKVARYQQYRAVNKVIDRLKNGVTRKEKSGVVWHTQGSGKSLTMV MLAVKMRRDPVLKQYKLVFVTDRTQLDSQLSTTFRNAQNETVHNADSVADLRSLLQKDAS DIVTAMVQKFQEAEQEGGFSKLNISDKIIVLADEAHRTQFGGLAMTINAALPNAPKIGFT GTPLLKTQKMDQAFGGYIDQYKINEAVEDGATVRIIYEGRQVKTDVVGDSLDVLFEEYFQ DYSEEDKRAIKKKYGVERAVREAPARIRWVCIDLLKHYREHILPNGFKGMIVVGSRHAAT VFKKTLDELGAPPSEVIISGSHNDPAYLAQYTDSTRQKSIIKDFTKPLDEDPTALLIVKD MLLTGFDAPIAQVMYIDRSLKDHTLMQAIARVNRTYKGKQAGFIVDYYGLSDHLTQALDL FSSDDVEGSYVTLRDEIPKLEAAHTRVAAIFKTVQGHDVDDYVLHLKDEEIRQQFDMAFK KFAKQMDVVLPDAAAKPFLADLRLWGKVQHAARNRYYDPGLNLHEAGAKVRKLVDEHIIS TGVDPKIPPIDLMDANFKVSIDETKSLESRASEIESAIKHHITVNLDEDPEYYKSLSLRL RDIIEQTNGKWEQQLELLLHMVGTMKTDHQQAAEALGLNPTEYAFYNILMAEVTQLLGED TVSETVNDEIKLKSQALVGVFEEATRIVDFFRKPDEIKRMKKEIKRALMDCSFNDRALVS VLQDRFMELAKTKFAS NT seq 3111 nt NT seq  +upstreamnt  +downstreamnt atgttccaagacgaaatccagaaagttgaacagcccgccattgaactgctgcagcgtcta ggttggacgtatgttcctggcacgctgctcacgcctgatgcgccgacccaatacggccaa aaagctgagcgggcctattaccgcgatgtcgtactagccaatcgcttggaacgggcaatc caacgcctaaacccatggctcagtgaagagaatctacgtaaggtgctgcgtgatatcacg catccgatccatgcggggctgatggagtacaaccaagcgttttggcaaatgctggttaac tatgtctctgtcgagcaagatcttgggaaagggcgcaagggacagacagtcaagattatt gattttgacaccccggacaataacgattttctttgtaccactcagttcaaaatcgaaggc ccgaatcagaagatcattcccgatattgtttgcttcgtgaacggcttgcctttggccgtg atcgagtgcaaatcgccttacattgcagatgcagtggcgcagggcatagatcagttgcac cgttatgccaatttgcgtgagccatcagccgaagagggagcgcagaaactgttctggtac aaccagttgatggtgtctacctgccgcgatcaggccaaggtagggacgattagctcgggc atgtcgcattatgccgattggaaggatgcctacccgctgactgttggccaggttcgtgat ctcttggaggctccaatcgccgacgacacattatctacccagtttcgcgatatgtcggca gctccttatctcctcacgacggcatgtgctgcagaacgagttcacagtgcccctgccgtg attaccgcacaagagtgcctgctagcgggtatgttttaccgctcacactttctggacatt attcagaactttgtgatctatgagccgattgatggtcgtctgatcaagaaagtggctcgc tatcaacagtatcgagcggttaacaaggttattgaccgtctgaagaacggagttacccgt aaagaaaagtccggggtggtgtggcatacccaagggtcaggtaagagtctgacgatggtt atgctggcggtgaagatgcggcgcgatccggtcttaaagcagtacaagctggtgttcgtg acagaccgcactcaactggacagccaactgtctacgacttttcgcaatgcgcaaaacgag acagttcataacgcggattcagtggctgatctacgcagcttgctgcaaaaggatgcgtcc gacattgtgacggctatggtgcagaagttccaagaagctgagcaagaagggggctttagc aagctaaacatcagtgacaaaattattgtgttggcagacgaggcacatcggacccagttt ggtggcttagccatgactattaatgccgctctgcccaacgcacccaagattggttttacg ggcacaccattgctcaagactcagaaaatggatcaggcttttggtggttatatcgatcag tacaagatcaacgaagccgttgaggatggtgctacggtgcgcatcatctatgaagggcgt caggtgaaaactgatgttgtgggtgattcgctggacgttttgtttgaagagtattttcaa gactacagcgaggaagacaagcgagcgatcaagaagaaatatggtgttgagcgtgctgtg cgtgaagcaccagcacggattcgttgggtttgtatcgaccttttaaagcattaccgagaa catatcctgcctaacggctttaaaggcatgatcgtcgtcggcagtcgccatgcagcgacc gtctttaaaaagaccctggacgagttgggtgcaccgccaagtgaagtgattatttcgggt agtcataacgacccggcctatctggcgcagtacaccgatagcacgcgccagaagtccatt atcaaggacttcaccaagccgttggatgaagacccgaccgccttgctcattgtgaaggac atgctgctgacgggttttgatgcgccgatcgctcaagtgatgtatatcgaccgtagcctg aaagatcacactttgatgcaggctatcgcacgcgtcaatcgtacctataaaggaaaacaa gccggtttcatcgtggattactacgggctatcggatcatttgacgcaggcattggatctg tttagcagcgacgatgtggaaggtagttatgtgaccttgcgcgacgagattcctaagttg gaggccgctcatactcgagtggcggccatcttcaaaacggtacagggtcacgatgttgat gactatgttttgcacctcaaagatgaggaaattcgtcaacagtttgatatggcctttaag aagtttgcaaagcagatggacgttgttttgcctgatgcagccgctaaaccttttttagcg gaccttcgactatggggcaaagtgcagcatgccgctcgtaacaggtattacgacccgggt ctaaatctgcatgaggcgggagccaaggtacgcaagctggtggatgaacatatcatcagt accggcgttgacccgaagatcccgcctatagatttgatggatgcaaacttcaaggtaagt atcgacgaaaccaagtcgctggagtcacgggcatcagaaattgaaagtgccatcaagcac catatcaccgtgaatctggatgaagaccccgaatactataagtcgctgagtctgcgccta cgggacattattgagcaaacaaatggtaagtgggaacagcaactggaattgctgttgcat atggtcggcaccatgaagaccgaccaccagcaggctgctgaggctctgggtttaaaccca actgagtatgcgttctacaacattttgatggcggaagtaacgcaacttttgggtgaggat acggttagcgagacagtgaatgacgaaatcaagctgaaaagccaggcactggtgggtgtt tttgaggaagcgacccgtatagtggattttttccggaaaccggatgagatcaagcgcatg aaaaaagaaattaaacgtgcgcttatggattgttcgtttaacgatagagccttggtgagt gtgcttcaagatcgatttatggaacttgccaaaaccaagttcgcatcatga

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