Alcaligenes faecalis JQ135: AFA_04080
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Entry
AFA_04080 CDS
T05446
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
afq
Alcaligenes faecalis JQ135
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afq03400
]
AFA_04080
Enzymes [BR:
afq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AFA_04080
DNA repair and recombination proteins [BR:
afq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AFA_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LXG
Motif
Other DBs
NCBI-ProteinID:
ASR88701
UniProt:
A0AB33CTZ2
LinkDB
All DBs
Position
884772..887426
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AA seq
884 aa
AA seq
DB search
MYDTPAVSMAQLQELNSAETVVLTVNKRYARRLLGHLSARLAGAGGTVAVPEIVPLGAWL
AQASDQLCFSEQWQPAAHQMDRFAALQRWEHSIEQCEEEGYFLDVGQAARLACEADTLLD
EWNIELKPGEASIDFERFMQWRSHYRQSLEQADLDDANLAAERVLKAVQAGALHMRHRYM
VLHGFHEYSPRLQSLLMGLQNMGVEILQLQHEEAQATEVHRVQAQDADTEWRLAVQWARR
QLDEDPDRTVAIVAAQLETQLPLVHRLLRQAMHTDQGALPYNVAAARSLAEWPVVEAALA
WLKALFTLATKGQAEPAMLGQALRLGACQAEQSEAGGRARIDKAWRDNRITQVSRKKFAD
MLSFHTPELALAWAKAVERFESVSAGAQGVDTWASVMRQCLEALGFPGTNRLDSAQFQTL
EALEALLLQLAQQAPVLGRISALKAQSALARMARENLFQPQRDPRSRLDVLGFLEAEGGR
WDAVWVLGLTDDILPAAVKPNPLIPAQVLRRVQAPRSTPERELEWARWMLSALLRCGNQV
LLSAPLNQGEQELRPSPLIAHWPVLEMPWAVQAEQAVAQEALLDEQGPSLKLEERIRGGI
SVLDTQARNPLWAFVKFRLHGQALPDYARVGDMNTRGVFLHRAVELFWLRVKDQDSLHEL
IGEDSLLDVVQVCIDQAAQEELADYGPVLRSLEMERGLAVLSQYAHQEAQRPPFALGATE
QELSWSRGLLRLSLRLDRLDDLADGEQLLMDYKTGIGELRPDKDWLRPRPVNLQLPFYAA
ALQDEGRTVSGLAFVRLHARQVGLSGLAAPGMDIEGLTELESAQQWTAQIAQWKQAVEGL
ADEFLQGQAANQIWNRNDLLYCDVLPFLRLFQEDLQDNGGEVSC
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacacccctgctgtttccatggctcaattgcaggagcttaatagtgccgaaacg
gttgtgttaaccgtgaacaagcgctacgcgcgccgcctgctgggacatttgtcggcccgt
ctggctggagcgggcgggacggtcgccgtgccggaaatcgtgcccttgggggcgtggctg
gcacaggccagcgatcagctctgcttttccgagcaatggcaaccggctgcgcaccagatg
gatcgcttcgccgccttgcagcgctgggaacacagcatcgagcagtgcgaggaagagggc
tacttcctggatgtcggccaggcagcgcgtctggcctgtgaagccgataccctgctggat
gaatggaatattgagctcaaacccggcgaggccagcatagattttgaacgcttcatgcaa
tggcgctctcactaccggcaaagcctggagcaggcggatctggatgacgcgaatctggct
gccgagcgcgtgctgaaagcggtgcaggccggcgccttgcacatgcgtcatcgctatatg
gtgctgcatggttttcatgaatactcgccgcgtctgcaaagccttttaatgggtttgcag
aatatgggagtggagattctgcagttgcagcacgaagaggcgcaggccacggaagttcat
cgggtgcaggcgcaggatgcggatacggaatggcgcctggcggtgcaatgggcgcgtcgt
caattggatgaggacccggatcgcacggtagccattgtggcggcgcagttggaaacgcaa
ctgccgctggtgcatcgcctcttgcggcaagccatgcacacggatcaaggcgccttgccc
tataacgtggcagcggcccgatccttggccgagtggcccgtggttgaagcagccctggcc
tggttgaaagccctgtttaccctggcgaccaaggggcaggccgagccggccatgctgggc
caagccctgcgtttgggagcgtgtcaggcggaacagtctgaagcgggcggccgtgcccgc
attgacaaggcctggcgcgacaaccgcatcacgcaagtgagccgtaaaaaatttgccgac
atgctcagttttcatacgcccgaactggccctggcctgggccaaggcggtggagcgcttc
gagtccgtgtcggccggcgctcaaggggtggatacctgggcttcagtgatgcgtcaatgc
ctggaggctttgggttttcccggaaccaatcgtttggatagcgcccagtttcaaaccttg
gaagctttggaggccctgctgctgcaactggcgcagcaagcccctgtcttgggccgtatc
agtgccttgaaggcgcaaagtgctctggcgcgcatggcccgtgaaaatctgttccagcca
cagcgtgatccgcgctcccgtctggatgtgctgggctttctggaggcggaaggcgggcgt
tgggatgccgtatgggtgctgggcctgaccgatgatattttgcccgctgccgtcaaaccg
aatcccctgatccccgcccaagtgctgcgccgggtgcaagccccgcgcagtacgccagag
cgggagctggagtgggcgcgctggatgttgagcgccttgctgcgctgtggcaaccaggtc
ttgctcagtgcgcctttgaatcagggggagcaagagctcagacccagccccttgattgct
cattggcctgtgcttgaaatgccttgggcggtgcaggcagagcaggccgtcgcacaggaa
gccttgctggacgagcaaggccccagtttgaagctggaagagcgcatacgcggcggaatc
agcgtgctggatacgcaggcccgcaatcctttgtgggcttttgtgaagtttcgtttgcat
ggtcaggccttgcctgattacgcccgtgtaggtgatatgaatacacgcggggtgtttctg
caccgcgccgtcgaactgttctggctgcgtgtgaaggatcaggacagcttgcacgaactg
attggcgaggactcgctgttggacgtggtgcaagtgtgtattgatcaggccgctcaggaa
gagctggccgattacggcccggtgctgcgcagcctggaaatggagcggggtctggctgtt
ttgagccaatacgcgcatcaggaagcccagcgtccgccgtttgccttgggcgcgacggaa
caggagttgagctggagccgtggcttgctgcgtttgagcctgcgtctggatcgtctggat
gatctggccgatggtgaacagttgctgatggactacaaaactggcataggcgaactcaga
cccgataaagattggctgcggcccagacctgtgaatctgcaattgccgttttatgccgcg
gccttgcaggatgaaggtcgaaccgtcagtggcttggcttttgtgcgcttgcatgctcgt
caggtgggcttaagtggtttggccgcgcccggcatggatattgagggcctgaccgaattg
gaaagtgcccagcagtggaccgcacaaatcgcgcagtggaaacaggcggtggaaggtctg
gcggatgagttcctgcaagggcaggccgccaaccagatctggaaccgcaacgatttgctg
tactgcgatgttttgccctttttacgtttgttccaggaagacctccaagacaatggagga
gaggtgtcatgctga
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