Alcaligenes faecalis JQ135: AFA_05115
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Entry
AFA_05115 CDS
T05446
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
afq
Alcaligenes faecalis JQ135
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afq03016
]
AFA_05115
Enzymes [BR:
afq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AFA_05115
Transfer RNA biogenesis [BR:
afq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFA_05115
Prokaryotic type
AFA_05115
BRITE hierarchy
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ASR88880
UniProt:
A0A0A2N5I0
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All DBs
Position
1129078..1129830
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AA seq
250 aa
AA seq
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MATRKRGQLIDGVLLLDKSDGMSSNHALQRARRTLDARKAGHTGTLDPFATGLLVCCFGR
ATKISATMLEADKAYEATLQFGQETDSGDLTGNVVSQAPADFAGVTLEALEAVLPAFRGP
ITQVPPMYSALKRDGKPLYEYARQGIELEREARHLVIHDLQVQDFTPQSARLFVRCSKGT
YIRTLAQDIGRALGCFAHLTALRRTELGPFHIDDAYTLDGLQAMEDPMSALLAIESLPTE
ILPKKLQSEG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcgaaaacgcgggcagttgattgatggtgtgctgctactggacaagtccgac
ggaatgtccagcaaccacgctttgcagcgtgcccgccgcactctggatgcccgcaaagct
ggccataccggaaccttggacccgtttgcgacgggtctgctggtttgctgttttggccgg
gctaccaaaatttctgccacgatgctggaagcagacaaagcctatgaagctaccttgcag
tttggacaagaaaccgattcaggcgacttgaccggcaatgtggtgtctcaggctccggca
gattttgccggcgtcaccctcgaggcgctggaagcagtattgcctgctttccgaggaccc
attacgcaggtgccgcccatgtattccgcgctcaagcgcgatggcaagcccctgtatgaa
tatgcccgtcagggtatagagctggaacgtgaggcacgacatctcgtgattcacgatttg
caggtgcaagactttacgccgcaatcggcgcgtttgtttgtacgttgcagcaagggaacc
tatatccggaccctggcgcaagacattggacgtgctctggggtgttttgcccatctgacg
gccttgcgccggacagaattaggaccttttcatatcgacgacgcctacaccctggatggg
ttgcaggcgatggaagacccgatgtcggccttgctggccatcgagagcttgcctaccgag
attttgcccaaaaaacttcaatcagaaggatga
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