Alcaligenes faecalis JQ135: AFA_05155
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Entry
AFA_05155 CDS
T05446
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
afq
Alcaligenes faecalis JQ135
Pathway
afq03030
DNA replication
afq03410
Base excision repair
afq03420
Nucleotide excision repair
afq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFA_05155
03410 Base excision repair
AFA_05155
03420 Nucleotide excision repair
AFA_05155
03440 Homologous recombination
AFA_05155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afq03032
]
AFA_05155
03400 DNA repair and recombination proteins [BR:
afq03400
]
AFA_05155
Enzymes [BR:
afq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFA_05155
DNA replication proteins [BR:
afq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AFA_05155
DNA repair and recombination proteins [BR:
afq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AFA_05155
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFA_05155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ASR88887
UniProt:
A0AB33CZ39
LinkDB
All DBs
Position
1136733..1139450
Genome browser
AA seq
905 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAYHAMPDLRNAQGQPTGALYGVINMLRRLLQDYQADYMVCVFDA
KGRTFRDDLYDQYKANRPSMPEDMAEQIEPIHKAVRAMGWHLICQSGVEADDIIGTLSRL
AAENGIETVVSTGDKDLAQLVNEHVQLVNTMSNEKLDIEGVTNKYGVRPDQIIDYLMLIG
DTSDNIPGVPKVGPKTAAKWLGEYGSLDELLQHADKIKGVAGQNLRDFSANFEMTRKLVT
VKLDCEVPGFTGDFGALEPEPRDNAVLQDIYETYGFRSWLRELTDDPKRVPAQDARVQAE
TPAAPAELDYQTVTTKEQLQSLLSLLEKAELVALDTETTSLDPLMARLVGLSVSVKAGQA
FYVPVAHRGSLDVEQLNKDDVLETLRPWLENAEAAKVLHNAKYDTHVLLNEKVSLRGIRE
DTMLQAYVLQSHKRVSMDELALQWLGLKGTSYEDICGKGAKQIGFDEVDIPVASHYACED
ADYTLRLHQCLRPQVAKQEGLERIYLLEVQASDVLTIVERNGVKIDVPTLARQSHELGQK
MLELENKAYELADQPFNMNSPKQVGEILFGKLGIPVVRKTASGAPSTDEDVLTRLAQDYP
LPQVLLEYRGLAKLKSTYTDKLPKMVNPDSGRVHTRYAQAAVITGRLASSDPNLQNIPVR
TAEGRRVRAAFVSELGKVVSADYSQIELRVMAHVSGDANLQQVFEQGGDVHTATAAEIFG
VDAKDVSSDQRRAAKAINFGLIYGMGEFGLASNLGITRDAARAYIDRYFARYPGVASYMT
RIKAQAHEQGYVETVFGRRLWLPELKGAKGPRMAGAERAAINAPMQGTSADLIKMAMVAV
QRWLEEKGLRTQMVMQVHDELVFDVPEDELDILRENLPGLMCNVAKLDVPLVAEVGVGDN
WEQAH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttgttgctcgttgatggttccagctatctgtaccgagcgtaccatgcg
atgcctgatctgcgaaacgcgcaaggccagcctacaggcgccttgtacggggtcatcaat
atgttgcgccgcctgctacaggattatcaggccgactatatggtatgcgttttcgatgcc
aagggccgcaccttccgggacgatctgtacgatcaatacaaggctaaccggccctccatg
cccgaagatatggcggagcaaatagagcctattcacaaagcggtacgcgccatgggctgg
catctgatttgtcagtccggcgtggaggctgacgatatcatcggcacactttctcgtctg
gcggccgaaaacggtatcgagacggtagtctctaccggagataaggacctggcccagctg
gtcaatgagcatgtgcagctggtcaacaccatgagtaacgaaaagctggatatagagggg
gtcaccaataagtacggagtacgcccagatcagattatcgattatttgatgctgattggc
gacacctcggacaatattccgggcgtacccaaggtgggccccaagacagccgccaagtgg
ttaggtgaatatggcagcctggatgagttgttgcagcatgccgacaaaatcaagggtgtg
gctggccagaatctgcgcgatttcagcgctaactttgaaatgacgcgcaagctggtgacg
gtcaagctcgattgtgaggtgcctggttttacgggtgacttcggtgcgctggagccggag
ccccgtgacaatgccgtgttgcaggatatctatgaaacctatggtttccgcagctggttg
cgtgaattgacggatgatcccaagcgcgtgcctgcccaggatgcacgcgtccaggctgaa
acgcctgcggcacccgctgagctggattatcagaccgtcacgacgaaagagcaattgcag
tccttgctaagcctgctggagaaggccgagctggtggcgctggatacggaaaccacgtcc
ttggaccctttgatggcgcgtttggtgggcttgtcggtgtcggtcaaggcgggccaggct
ttttatgtgccggtcgctcaccgtggttcgctggatgtagagcagttgaataaagacgat
gtgctggaaactctacgtccctggctggaaaacgcagaggcggccaaggtcctgcacaat
gccaaatacgatacgcatgtcctgctcaatgaaaaagtcagcttgcgcggtatccgcgag
gacaccatgttgcaggcgtatgtcttgcagtcgcacaagcgcgtcagcatggatgagctg
gccttgcaatggctgggtttgaaaggcacgtcttacgaggatatttgcggcaagggtgcc
aagcagatcggttttgacgaggtggacatccctgttgcgtctcactatgcctgtgaagat
gcggactacaccttgcgtttgcatcagtgcctgcgtcctcaagtggccaagcaagaaggt
ctggagcgtatttatttgctggaagtgcaggcttcggatgtgctgacgattgtggagcgc
aatggcgtcaagattgatgtgcctaccctggcgcgtcaaagccacgagctgggccaaaaa
atgctggagctggaaaacaaggcttacgagttggccgaccagcctttcaacatgaactcc
cccaagcaagtgggcgagattctgttcggcaagctcggtattccagtggttcgtaaaacg
gccagtggtgctccgtctactgacgaggacgtcctgacccgcttggctcaggattacccc
ttgccgcaggtgctgctggagtaccgtggtctggccaagctcaagtccacttatacggac
aagctgcccaaaatggtgaatccggacagtggccgtgtgcatacccgttatgcacaggct
gccgtgataactgggcgtctggcctcctccgatcctaacttgcagaacattccggtgcgt
acggcagaagggcgtcgtgttcgtgccgccttcgtgtccgagttgggcaaagtggtctcg
gctgactattcccagatcgaattgcgtgtgatggcgcatgtatcgggcgacgccaatttg
cagcaggtctttgagcagggtggggacgtgcacacagcgaccgctgccgagatttttggt
gtggatgccaaagatgttagctctgaccagcgccgtgccgccaaggcgattaacttcggt
ctgatctacggcatgggtgagtttggtctggccagcaacctgggcattacccgtgatgct
gcccgtgcttatattgatcgctacttcgctcgctatcctggcgtggccagctatatgact
cgcatcaaagcccaggctcatgagcaaggttatgtggaaaccgtgtttggtcgccgccta
tggctgccggaactgaaaggtgcaaaagggccgcgcatggccggtgcagagcgtgccgcc
attaatgcaccgatgcagggcacgtcggctgacctgatcaagatggccatggtggctgtg
cagcgttggctggaagaaaagggtctgcgcacgcagatggtgatgcaggtccatgacgaa
ctggtattcgatgtacctgaggacgagctggatattttgcgtgaaaacctgcctggcctg
atgtgcaatgtggccaagctggatgtcccactggttgccgaggtgggggtgggcgataac
tgggaacaggcgcactaa
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