Alcaligenes faecalis JQ135: AFA_05900
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Entry
AFA_05900 CDS
T05446
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
afq
Alcaligenes faecalis JQ135
Pathway
afq03030
DNA replication
afq03430
Mismatch repair
afq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFA_05900
03430 Mismatch repair
AFA_05900
03440 Homologous recombination
AFA_05900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afq03032
]
AFA_05900
03400 DNA repair and recombination proteins [BR:
afq03400
]
AFA_05900
Enzymes [BR:
afq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFA_05900
DNA replication proteins [BR:
afq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFA_05900
DNA repair and recombination proteins [BR:
afq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFA_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ASR89017
UniProt:
A0AB33CT00
LinkDB
All DBs
Position
1298769..1299458
Genome browser
AA seq
229 aa
AA seq
DB search
MKWLSWLPWRKPSFAARSLSLSWSAIDEQALDNAAFTVLDLETSGLEPKRHHIVQIGAVR
LESGSIALGNVWSGLVRTHGERSPESLLIHEISPQRQEQGEPLPQLMRDFARYSENTVWV
AWDADFDLAFLDRAWPQAGLEQARPLILDLAELAACVLPEWRGRRLGLDDCLRYCGLPVS
DRHDALGDALVSAQLMQLLIGRARQKGVVTIGQARRLMQSHKQRQAHAF
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggctctcctggctaccttggcgcaaaccctcgtttgctgcgcgcagcctctcc
ttgtcctggagcgcaatagacgagcaggcgttggataacgccgcttttaccgtgctggat
ctggagaccagcggtctggagcccaagcgtcaccatattgtgcagattggtgcggtacgg
ctggaaagcggttccattgccttgggtaacgtctggtccggtctggttcggactcatggt
gagcgcagcccggaaagcctgctgattcatgagatcagcccacagcgacaggagcaaggc
gagccactgccacagctcatgcgtgactttgcgcgttattcagagaacacggtgtgggtg
gcctgggacgccgactttgatctggcatttctggatcgtgcctggccgcaggcaggtctg
gagcaagcccggcccttgattctggacctggcggagctggctgcttgtgtattgcctgag
tggcgtggccgccgcctgggtctggacgattgtctgagatattgtggcctgcccgtcagt
gaccgccatgatgccttgggtgatgccttggtcagtgcgcagttgatgcagctcttgatt
gggcgtgcccggcaaaaaggcgtggtgaccatcgggcaggcccggcgcctgatgcagtca
cacaagcaacggcaggcccacgcgttttaa
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