Alcaligenes faecalis JQ135: AFA_06005
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Entry
AFA_06005 CDS
T05446
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
afq
Alcaligenes faecalis JQ135
Pathway
afq02020
Two-component system
afq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AFA_06005 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AFA_06005 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afq03021
]
AFA_06005 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
afq02035
]
AFA_06005 (fliA)
Transcription machinery [BR:
afq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AFA_06005 (fliA)
Bacterial motility proteins [BR:
afq02035
]
Flagellar system
Flagellar assembly proteins
Stator
AFA_06005 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
KORA
cwf21
HTH_37
HTH_24
DUF5996
Motif
Other DBs
NCBI-ProteinID:
ASR89035
UniProt:
A0AB33CU65
LinkDB
All DBs
Position
1315876..1316637
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AA seq
253 aa
AA seq
DB search
MPRSEDALVEQYAPLVRRQALQLVSRLPPSVELDDLMQAGMMGLLDAVRRYQVVAEAQFE
TYAVTRIRGAMLDELRSQDWLPRSVRTKARQIEVAVSTLRQELLREPTESEIAQALSMSM
DDYYELLDEAVGVQVIHYEDLKRHADPSADALEFLEDSTREQAYFDNPLNLLTSQGLRQA
LITAIDHLPEREKLLFALQFEQDLNQKEIALVLGVTEGRVSQLRSQAVARIRASLAKDQW
DAISDSAEFQVLL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttcagaagacgccttggttgagcagtacgccccactggtacgccgccaagcg
ctccagcttgtgtcgcgtctgcctcccagtgtcgagctggacgatctgatgcaagcgggc
atgatgggcctgctcgatgctgtgcgccgctaccaggtggtggccgaggcccaatttgaa
acctacgcggtgacccgtatccggggggcgatgctggacgagctgcgcagccaggactgg
ctgccacgcagtgtgcgcaccaaagctcgtcagattgaagtggctgtcagcaccttgcgc
caggaactgttgcgcgaacccaccgagtcggaaattgcccaagccctgtccatgagcatg
gacgattactacgagctgctggacgaggcagtaggggttcaggttattcactacgaagac
ctgaaacgccatgccgatccgtccgctgatgcactggagtttctggaagacagcacgcgt
gaacaggcttacttcgacaatcccctgaacctgttgacctctcagggtctgcgacaagcc
ctgattaccgccatcgaccacctgcccgaacgcgaaaagctgctttttgccctgcaattc
gagcaagacctgaaccagaaagaaatcgccttggtgctgggagtgaccgaaggccgcgtg
tctcaactacgcagccaggccgtcgcccgtatccgcgccagcctggcgaaagatcaatgg
gacgccatttccgatagcgcggaatttcaggtgttgttgtaa
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