Alcaligenes faecalis JQ135: AFA_07540
Help
Entry
AFA_07540 CDS
T05446
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afq
Alcaligenes faecalis JQ135
Pathway
afq03420
Nucleotide excision repair
afq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AFA_07540
03430 Mismatch repair
AFA_07540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afq03400
]
AFA_07540
Enzymes [BR:
afq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AFA_07540
DNA repair and recombination proteins [BR:
afq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFA_07540
MMR (mismatch excision repair)
Other MMR factors
AFA_07540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ASR89306
UniProt:
A0AB33CSM6
LinkDB
All DBs
Position
1620708..1623002
Genome browser
AA seq
764 aa
AA seq
DB search
MMDRLNPEQRAAVTLPSGHALVLAGAGSGKTSVLTSRMAWLIQTGQVSPHGLAAVTFTNK
AAREMLTRLTSLLPIDTRGMWVGTFHGLCNRLLRMHYRDAGLVQTFQILDTADQLASIKR
MVKANNVDDEKFPPKEIQKFINACKEDGQRPGDLEAHDPHRRRLIELYQLYQEQCEREGV
VDFGELLLRAYELLSRNAPIREHYQRRFKHILVDEFQDTNVLQYRWLRLLAGDQACMFAV
GDDDQSIYAFRGANVGNMADFERDYARGNVIRLEQNYRSCGHILDSANALIENNSGRLGK
NLWTDSGEGELVRISELASDALEAQWIVDEVRALIAEGKPRREIAILYRSNAQSRVIEHR
LFSQGLPYKVYGGHRFFERQEIKHVLAYLRLMDNADDDTAFLRVVNFPTRGIGARSVEQL
ADLARERGTSLLRAIPYLQGRAAASLMRFSNLIQDMASQAQILSLPELIEHVVHDSTLLA
HYQADREGAERLENLQELVNAATVFVGEEGFAELPAGRVPEAVAGESEQAMQNPDQPAAS
VLAPMSPLGSFLTHASLEAGDNQAQAGQDAIQLMTIHAAKGLEFDAVFITGLEEGLFPHE
NSLFDPGGIEEERRLMYVAITRARQRLYITLAQSRMLHGQTRYAMRSRFLEELPEQHIKW
LSARYTSPPMQSEASSGAFRRGQSWESKDKSYSAQPYGGRSHTSVLEVNGQTFRVGQGVH
HNRFGDGTIVNLTGQGDDAQALIQFREVGSKTLALAIAKLDPVS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcgcttaaacccggaacagcgagccgccgttactctcccctctggccatgcc
ctggtgctggccggagcgggtagcggaaaaaccagtgtcctgacctcccgaatggcctgg
ttaatccagactgggcaggtcagccctcacggactggccgctgttaccttcaccaacaaa
gccgcgcgcgaaatgctgacgcggcttacttctttattgcctatcgatactcgcggaatg
tgggtcgggacctttcacggcctgtgtaatcgcttgctgcgcatgcattaccgcgatgcc
ggtctggtacagacgttccagattctggatacggcagatcagttggcctccatcaagcgc
atggtcaaggccaacaatgtggatgatgagaaatttccgcccaaggaaattcagaagttc
atcaacgcctgtaaagaagacggccaacgtcctggcgacctggaagctcatgaccctcac
cgccgccgcctgatcgagctttaccagctttatcaagagcagtgcgaacgtgaaggtgtg
gtggactttggcgagctactgctgcgcgcttacgagctgctgtctcgcaatgcaccaatc
cgcgagcattatcagcgccgcttcaaacacattctggtggacgagttccaggacaccaac
gtgctgcagtatcgctggttgcgtcttttggccggtgatcaggcctgcatgtttgccgtg
ggcgacgatgaccagtcgatctatgctttccgtggcgcgaacgtgggcaatatggccgac
ttcgagcgcgactatgcccgtggcaatgtgatccgcctggagcagaattatcgttcctgc
ggtcatattctggattccgccaacgcgctgatcgagaacaatagtggtcgcctgggcaag
aatctgtggaccgatagcggcgaaggcgagctggtacgcatcagcgaactggcttcggat
gccctggaagcacagtggattgtggatgaagtccgcgccctgattgctgaaggcaagcca
cgtcgtgaaattgccattctgtatcgcagcaacgcccagtcccgagtgattgagcacagg
ctgttttcccaaggtttgccctacaaagtgtatggcggccaccgtttcttcgagcgtcag
gaaatcaagcacgtgctggcttacttgcgcctgatggataacgcggatgatgacaccgct
tttctgcgcgtcgtgaatttcccgactcgcggaattggtgcccgttcggtagagcaactg
gccgatttggcgcgcgagcgcggtaccagtttgctgcgtgccatcccttatctgcaagga
cgtgcggctgccagcttgatgcgtttctcgaacctgattcaggatatggccagccaggcg
cagatcttgtctttgcccgagctgattgaacacgttgttcacgacagtaccttgctggcc
cattatcaggccgaccgcgaaggtgccgaacgcctggaaaacttgcaggagttagtcaac
gcggccacggtttttgtgggtgaagaaggctttgccgagctgcctgcaggtcgagtgcct
gaagccgtggcgggcgagtccgagcaggccatgcaaaatccagatcagccggctgcctct
gtgctggcccccatgtcgccgttgggctccttcctgacccatgcatctttggaagcaggg
gacaatcaggcccaggcaggccaggatgccattcaactgatgacgatccatgccgccaaa
ggtctggagttcgatgcggttttcattactggcctggaagaggggttgttcccgcatgag
aacagcttgttcgatccgggcggtatcgaggaagagcgtcgcttgatgtacgtggcgatt
acgcgggcgcgtcagcgtctatacatcaccttggcgcaaagccgcatgttgcacggccag
acgcgttacgccatgcgttcgcgctttctggaagagttgccggagcaacatatcaagtgg
ttgtcggcccgctacactagcccgcccatgcaatccgaggctagctcgggggcatttcgt
cgcggtcaaagctgggagtccaaagacaagagctattcggcccagccttacggcggtcgt
agccacaccagtgtgctggaagtgaatgggcagacgttccgtgtggggcagggagtgcat
cacaaccgttttggtgacggcaccatcgttaatctgacggggcagggtgacgacgcccag
gccttgattcagttccgtgaagttggtagcaagactctggccttggccatcgccaagctg
gatcctgttagctga
DBGET
integrated database retrieval system
