Alcaligenes faecalis JQ135: AFA_10590
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Entry
AFA_10590 CDS
T05446
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
afq
Alcaligenes faecalis JQ135
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afq03009
]
AFA_10590
Enzymes [BR:
afq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AFA_10590
Ribosome biogenesis [BR:
afq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AFA_10590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_ANTKMT
Methyltransf_25
RrnaAD
MTS
TRM5-TYW2_MTfase
Methyltransf_23
Cons_hypoth95
Methyltransf_11
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
ASR89859
LinkDB
All DBs
Position
complement(2296451..2297905)
Genome browser
AA seq
484 aa
AA seq
DB search
MCSTALAAFCLFLPAVRKAHCKISDSPSFAAMQLRHFAWQDAYLGFYRMSDVLLIESLDL
EGRGVAHKEGKVVFVEGALPGEEVLAETVRSKDSYDKARMTALLKASSQRAEPPCPNFGV
CGGCAMQHLEPSAQVAVKQRVLEDSLGHIGKVKPGRVLAPLHGPYWGYRYRARFSMRYVP
KKGGVLVGFREKNGRYVVDMTECRVLPAKVSALLAPLRTCLAGLSRPDRLPQIELAMGDK
ITTLTLRHMEPLTGEDIQRLQDFGQEHDISWWLQPKGPETAHPLLREDADKLAYALPEFD
LRMPYRPTDFTQVNHDINRSLISRALTLLDVKPEHRVADLFCGLGNFSLPLARRAAEVVG
IEGSSTLTERAGEAALAHDLQDKAKFTTLNLFEVDVQWLRDLGHFDRMLIDPPRDGAFAV
ATALAQLEKHERPERLVYVSCSPGTLARDAGVLVHQGGYTLESAGVVNMFPHTAHVESIA
VFTR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
ctgtgctcaaccgctcttgccgcattctgcttgtttttacccgctgtgcggaaggctcat
tgtaaaatcagcgattcgccatcatttgctgcaatgcaactgcgccattttgcttggcag
gacgcttatttaggtttttatcgaatgtctgacgtattgttaattgaatcgctggatctg
gaaggacgcggcgtcgcccataaagagggcaaagtggtgtttgtggaaggtgctttgcct
ggcgaggaagtgctggccgagacggtacgctccaaagattcatacgataaagcccgtatg
acggctttgttgaaagcctcgtcccagcgtgccgagcctccctgtcccaactttggtgtc
tgtggtggctgtgccatgcagcacctggagccttcggcccaggtggcggtcaaacagcgt
gtgttggaagactccctgggtcatattggcaaggtcaaacctggccgcgtcttggcgcca
ttgcacggtccctactggggttatcgttatcgcgcccgtttctccatgcgctatgtgcct
aaaaaaggcggagtgctggtgggtttccgtgaaaagaatggccgctacgtggtggacatg
acggaatgtcgtgttttacctgccaaggtgtccgccttgctggcgcctttgcgcacctgt
ctggcaggcctgtcccgaccggatcgtttgcctcagatcgagctggccatgggcgacaag
atcacgaccttgaccttgcgtcatatggagccattgacgggcgaagatattcaacgcctg
caagacttcggccaggagcacgatattagctggtggttgcagcctaaaggccctgaaaca
gcgcaccctttgttgcgtgaggatgcggacaaactggcgtacgcactgcctgagtttgat
ctgcgcatgccgtatcgccctacggattttacgcaggtgaaccacgacattaaccgcagc
ctgatctcgcgtgccttgaccttgctggacgtcaaacccgagcaccgtgtggccgacttg
ttctgtggtctgggtaacttcagcctgccgttggcacgccgcgccgccgaagtggtcggg
attgaaggcagcagcaccttgaccgaacgtgccggtgaagcggccttggcccatgacctg
caggacaaggcgaaatttactaccctgaacctgtttgaagtggacgtgcaatggctacgt
gacctggggcatttcgaccgcatgttgatcgacccgccgcgcgatggtgccttcgctgtg
gccaccgctttggcacagttggaaaagcacgaacgccccgagcgtctggtttacgtttcc
tgtagtccaggtacgttggcgcgcgatgccggtgtactggtgcatcaaggtggctatacg
ctggaatcagccggtgtggtgaatatgtttccgcacacggcgcacgtggaatcgattgcg
gtttttacgcgttaa
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