Alcaligenes faecalis JQ135: AFA_12005
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Entry
AFA_12005 CDS
T05446
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
afq
Alcaligenes faecalis JQ135
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afq03032
]
AFA_12005
03400 DNA repair and recombination proteins [BR:
afq03400
]
AFA_12005
Enzymes [BR:
afq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AFA_12005
DNA replication proteins [BR:
afq03032
]
Prokaryotic type
DNA Topoisomerases
AFA_12005
DNA repair and recombination proteins [BR:
afq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AFA_12005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ASR90114
UniProt:
A0AB33CV77
LinkDB
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Position
complement(2599070..2601754)
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AA seq
894 aa
AA seq
DB search
MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRLAQDFSMRYTLVDGQGNFGSIDGDNAAAM
RYTEIRLAKIAHELLADIDQETVDFVPNYDGSEKEPALLPSRLPNLLVNGSSGIAVGMAT
NIPPHNLAEVVNGCLYCLSHPECTVDELIEYIAAPDFPTGAIIYGMSGVREGYRTGRGRV
IMRASTHFEDMEKGNRQAIVVDAIPYQVNKKSLQERIAELVNEKRIEGISDIRDESDKDG
MRLVIELKRGEVPEVVLNNLYKNTQLQETFGMNMVALVDGQPRLLNLKQLVDYFLSHRRE
VVTRRTVFQLRKARERGHVLEGLAVALANIDEFIEIIKAAPTPPVARVELMARSWDSGLV
REMLARADTSAIVGGRQAYRPDNLGAEFGMGSEGLYRLSDVQAQEILNMRLQRLTGLEQD
KIVNEYREVMDKIADLLDILASPARVSAIIGDELIAVRDEFSATGKDVRRSQIEHNATEL
DTEDLITPMDMVVTLSHTGYIKSQPLSEYRAQRRGGRGKQATTMKEDDWIDKLFIANTHD
YLLCFSNRGRVYWLKVWEVPQGSRNSRGRPIVNMFPLEEGEKINVVLSVKEFSEDQFVFM
ATSRGTVKKTPLSDFSNPRKAGIIAVGLDEGDYLIGAQLTDGVHDVMLFSDAGKAVRFDE
GDVRPMGRAARGVRGMTLEEGQSVIALLVAEDETQSVLTATENGFGKRTPIGEYTRHGRG
TKGMIAIQTSARNGKVVGAVLVRETDEIMLITNAGVLVRTRVAEIREMGRATQGVTLISV
DDDSELSGVYRVVETDDEVDAELGEDGQAPEGLEQDNQTDSAQDQADPSGEENE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggattcctttgccaaggagacgcttcccgtttcgcttgaagaggagatgcgccgcagc
tacctcgattacgccatgagcgtgattgtgggccgtgctcttcccgacgtgcgagatggt
ttgaagcccgtgcatcgccgtgttctgttcgccatgcatgaactcaataacgactggaat
cgtgcctataagaagtcggctcgtatcgtcggtgatgttatcggtaagtaccaccctcat
ggtgactctgccgtctatgacacgatcgtgcgtctggcgcaggacttttccatgcgctac
accctggtcgacgggcaaggtaactttggttccatcgacggggataacgctgcagccatg
cgttacaccgaaatccgtctggccaagatcgcccacgaactgctggccgatattgaccag
gaaaccgtggatttcgtgcccaactatgatggcagcgaaaaagaaccggccctgttgccc
tcgcgtctgcccaacctgctggtgaatggcagctcgggtattgccgtgggtatggctacc
aatattccaccgcataacctggctgaagtggtcaatggctgtctgtattgcctgagccac
cccgagtgcacggtcgatgaactgatcgaatacattgcggctcccgactttccgactggc
gccattatttatggcatgtccggtgtgcgtgaaggctatcgcaccggtcgtggccgcgtc
atcatgcgcgccagtacgcactttgaagacatggaaaagggcaaccgtcaggccattgtg
gtcgacgccatcccctaccaggtcaacaagaagtcgctgcaagaacgcattgccgagctg
gtcaacgaaaagcgcatcgagggtatttccgatattcgcgacgagtccgacaaggacggt
atgcgtttggtcattgagctcaagcgtggcgaagtgccggaagtggtgctgaataacctc
tacaagaacacgcagttgcaagagaccttcgggatgaacatggtggcactggtcgatggc
cagccccgtttgcttaacctgaaacagttggtcgattacttccttagtcaccgacgtgaa
gtggtcacccgtcgcactgtgtttcaactgcgcaaggcgcgtgagcgcggtcatgtgctg
gaaggtctggctgtcgccctggctaatattgatgaattcatcgaaatcatcaaggccgct
cctacgccgccggttgcccgcgtcgagctgatggctcgttcctgggattccggtctggtg
cgcgagatgttggcccgtgctgataccagcgccattgtgggtggccgtcaggcttatcgt
ccggataatctgggtgccgaattcggcatgggctcggaaggtctgtaccgtctgagcgac
gttcaggcccaggaaattctgaacatgcgcttgcagcgcttgaccggcctggagcaggac
aagattgttaacgagtaccgcgaggttatggacaagattgccgacttgctggacatcctg
gccagtcccgcccgtgtgtccgccattattggcgacgagctgatcgccgtgcgcgacgag
ttctcggcgaccggcaaggatgttcgtcgctcgcaaatcgagcacaacgcgaccgaactg
gataccgaagacttgatcaccccgatggatatggtggtgactctctcgcataccggctac
atcaagagccagccgctgtctgaataccgagctcagcgtcgtggtggccgtggcaaacag
gccaccaccatgaaagaggacgactggatcgacaagctgttcatcgccaacacgcacgat
tacctgctgtgcttctccaaccgtggccgtgtgtactggctcaaggtctgggaagtgcca
caaggttcacgcaactcgcgtggccggcctatcgtcaatatgttccctctggaagagggc
gagaagatcaacgtggtgttgtccgtcaaggaattcagcgaagatcagttcgtgttcatg
gcaacctcgcgcggcacggtcaaaaagaccccgctgtccgacttctccaaccctcgcaag
gccggcattatcgctgtgggtctggatgagggcgactacctgatcggggctcagctgacc
gacggtgttcacgacgtcatgttgttctctgacgccggcaaggcggtgcgctttgatgaa
ggcgatgtacgtccaatgggccgtgccgcccgtggcgtacgcggcatgactctggaagag
gggcagtccgtgatcgccttgctggtggcagaggacgaaacgcaatccgtgctgaccgcg
accgagaacggttttggcaaacgcactccgattggcgaatacacgcgtcacggtcgtggc
accaagggcatgattgccatccagacttcggcccgtaacggcaaggtcgtaggtgccgtc
ttggttcgtgaaaccgacgaaatcatgttgattaccaacgcgggtgtgctggttcggacg
cgtgtggccgagatccgtgaaatgggtcgtgcaacgcaaggtgtgaccttgatcagcgtc
gatgacgacagcgaactgtctggtgtgtaccgcgtggtagagaccgatgacgaggtcgac
gccgagctgggcgaagacggtcaagcgccagaaggtcttgagcaggacaatcaaactgat
tccgcccaagatcaggcggacccttctggcgaggaaaacgagtaa
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