Alcaligenes faecalis JQ135: AFA_14455
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Entry
AFA_14455 CDS
T05446
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
afq
Alcaligenes faecalis JQ135
Pathway
afq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AFA_14455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afq03400
]
AFA_14455
DNA repair and recombination proteins [BR:
afq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFA_14455
RecFOR pathway proteins
AFA_14455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
YidB
Transposase_20
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ASR90552
UniProt:
A0AB33D3T9
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All DBs
Position
3138133..3138714
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AA seq
193 aa
AA seq
DB search
MIGRIRGTLIEKQPPTICVDVGGVGYEIDVPMSTLYQMPELGAQVNLFTHLAIREDAHVL
FGFSSLNERSTFKALIKVTGIGARTALSLLSGMSAEELADAITRQETSRLVKIPGIGKKT
AERLLLELRGKLGADLGGGGAVSAVHNSRDDVLHALEALGYSNKEASIAVKALPDDIDVS
EGIKQALKSLSRA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgataggtcgcatccggggtaccttgatcgaaaaacaaccgcctaccatctgcgtggat
gtagggggggtcggttatgaaatcgatgtacccatgagtacgctctaccaaatgccggaa
ctgggcgcgcaggtcaatctgttcacccatctggccattcgtgaagatgctcacgtgctg
tttggcttttccagcctgaacgagcgcagcaccttcaaggcactgatcaaagtcaccggt
attggtgcccgcacagccctgtccttgctctcgggcatgagcgctgaagaactggccgat
gccatcactcgccaggagacttcccgtctggtgaagattccaggcataggcaagaaaaca
gccgagcgtcttttgctggaactgcgtggcaagctgggtgcagacctgggtggcggtggc
gccgtcagcgccgttcacaatagccgtgatgatgtgctgcacgccttggaggcattgggc
tactccaacaaggaagccagtattgctgtcaaagcactacctgacgatattgatgtgtcg
gaagggatcaagcaggccttgaagtcgctgtcacgcgcgtga
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