Alcaligenes faecalis JQ135: AFA_14485
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Entry
AFA_14485 CDS
T05446
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
afq
Alcaligenes faecalis JQ135
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afq03400
]
AFA_14485
Enzymes [BR:
afq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AFA_14485
DNA repair and recombination proteins [BR:
afq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AFA_14485
Prokaryotic type
AFA_14485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASR90557
UniProt:
A0AB33D367
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All DBs
Position
3143920..3145359
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AA seq
479 aa
AA seq
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MSISTAPDQTPRVLCWLRRDLRLHDHAALHHALKSGLPVACVFIFDSTILDSLPADDVRL
AFIHDSLLQVQEQLRQYGSELITAHGDPVQKIPELANRLNAKAVYANEDYEPAAMARDQT
VSHTLSGQGMELKLFKDQVIFARDEILTQQKQPYTVFTPYKRNWLARIQSEDAQAYDCSQ
GEWAALPEQALPDLEELGFQEKSRAKLLSPAGWQGAQTLLEQFEPRIHAYHERRDFPAKR
GVSYLAPHLRFGTLSIRQAVSLAWPSDSDGAATWLSELIWREFYQQFLWHHPETATESFK
PAYKDLPFPNREDWFQAWKDGQTGYPIVDAAMRQLNQSGYMHNRLRMISASFLVKDLLID
WRWGEQYFAQKLLDYDMASNVGGWQWAASTGCDAQPYFRIFNPITQSRKFDPDGQFIRRY
VPELASLDKQAIHAPWQAKQLPIEFRSGKDYPAPIVDHDTQRHLALALFKQAGEQEQAD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatctctactgctcccgatcaaaccccacgtgtcctatgctggctgcgccgcgat
cttcgcctgcacgaccacgcggccttgcaccacgccctgaaaagcggtttgcctgtggcc
tgtgtatttatctttgacagcacaatcctggactccttgcctgccgacgatgtacggctg
gcttttatacatgacagtctgctgcaggtgcaggaacaactgcgccaatatggcagtgaa
ctgatcacggctcacggtgacccagtacagaaaattcccgagttggcaaaccgcctgaat
gcgaaggcggtctatgccaatgaagactacgaacctgcggccatggcacgagatcagact
gtcagtcataccctgtctggccaaggcatggaactaaagctattcaaggaccaggtcatc
tttgcgcgggatgaaatcctgacacagcaaaaacaaccgtatacggtttttacaccttac
aagcggaactggctggcgcgtattcaatcggaggatgcacaagcctatgactgctcgcaa
ggagaatgggccgccctgccagagcaagccctacctgacttggaagaattaggctttcag
gaaaaatctcgcgcgaaactgctcagtcccgccggttggcaaggcgcccagacattgctg
gaacaatttgagcccagaatccatgcctatcatgaacgccgggactttccagccaaacga
ggcgtgtcctatttagccccccatctgcgctttggaacactatccatacgccaagccgta
tctctggcttggcccagcgactccgatggcgcggccacttggctgagcgaactgatctgg
cgagagttctaccagcagttcctatggcatcacccagaaacggcgacagagagcttcaag
ccggcctacaaggacctgcctttccctaatcgcgaagactggtttcaggcctggaaagac
ggccagaccggctatccaattgttgatgccgccatgcgtcaattgaaccagtcaggctat
atgcacaaccggctgcgcatgataagtgcgtcctttctggtaaaagacttgctgatagac
tggcgatggggggagcaatattttgcccagaagctgcttgattacgatatggcttctaac
gtggggggctggcaatgggccgcttccaccggatgcgatgcgcagccttactttcgcatc
ttcaaccccataacccaatcgcgtaaatttgatccagacggacagttcatacgtcgatat
gtgcccgaactggcgtcgctggacaaacaagctattcacgcgccttggcaggccaagcag
ctccctatcgaattcaggtcagggaaagactacccggcccccatcgtagaccatgacaca
caacggcatcttgctttggccttattcaagcaagcaggagagcaagaacaagcggattga
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