KEGG   Alcaligenes faecalis JQ135: AFA_15190
Entry
AFA_15190         CDS       T05446                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
afq  Alcaligenes faecalis JQ135
Pathway
afq03030  DNA replication
afq03430  Mismatch repair
afq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:afq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AFA_15190
   03430 Mismatch repair
    AFA_15190
   03440 Homologous recombination
    AFA_15190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afq03032]
    AFA_15190
   03400 DNA repair and recombination proteins [BR:afq03400]
    AFA_15190
Enzymes [BR:afq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AFA_15190
DNA replication proteins [BR:afq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AFA_15190
DNA repair and recombination proteins [BR:afq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AFA_15190
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: ASR90682
UniProt: A0AB33CXM6
LinkDB
Position
complement(3307260..3307985)
AA seq 241 aa
MRQIILDTETTGLEPREGHRIVEVGGVELFNRKLTGRHLHLYLNPDRDSDPEALAIHGLT
TEFLAGHPRFKDVVDQVLDFVQGAEVIIHNASFDTRFLDAELQKVGKGPFSQYCDSITDS
LLVAREMHPGKRNSLDALCERYGISNSHRTLHGALLDSELLADVWLAMTRGQDALLMDFD
ESDSQGGDGSDLSLGKFDPSVLKVLRASEADQAEHEKYMDVLEKQNKKPPMWREMLNPAA
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgtcaaattattctggatactgaaaccaccggtctggagccacgcgaggggcaccga
attgttgaagtgggtggggtcgagttgttcaaccgtaaattgacgggccgccatctgcac
ttgtatctgaacccggatagggattctgatcccgaggccttggccattcatggtctgacc
acggaatttctggccggtcatccacgtttcaaggatgtagtcgatcaggtgctggatttt
gtgcagggcgcggaagtcattattcataacgcctcctttgatacccgctttctggacgct
gaattgcagaaggtaggcaagggaccgttctcgcaatactgcgacagcattactgactcc
ttgctggtggcgcgggaaatgcaccccggcaagcgcaactctctggatgccttgtgcgaa
cgctacggtatttccaactctcaccgtaccttgcacggcgctttgctggactcggaattg
ttggccgacgtctggctggccatgacgcggggtcaggatgcgttgttgatggactttgac
gagtccgacagtcaaggtggtgatggcagcgatttgagcctgggcaagtttgatcccagt
gtgctcaaagtgctgcgtgcgtccgaagctgatcaggccgagcacgagaaatacatggac
gtgttggaaaaacagaacaagaagccgcccatgtggcgcgagatgctcaatccagcagca
gagtaa

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