Acidithiobacillus ferrooxidans ATCC 23270: AFE_0002
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Entry
AFE_0002 CDS
T00810
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AFE_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_0002
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AFE_0002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
DUF2813
AAA_29
ABC_tran
AAA_27
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ACK79073
UniProt:
B7J3A4
LinkDB
All DBs
Position
1185..2237
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AA seq
350 aa
AA seq
DB search
MPLEALHIQSVRCIETLDLKTDRQWNWLIGANGAGKSSVLEAIHVLGTGQTWRHGSRHVL
REGDDAYLVSAHLSGHFLALRRRGEEREIRYDGEPLGSAWLLLDILPLQSLHEDNSHFVS
GTAEGRRRVLDWGIYYADRYYGTVFRQYRRALQQRNAWLKSDHGRQPWDDGVIVAGEDIQ
QRRQAHLAAVQLEVVTLWERWSGSLSGLSLHLHSGWKEGMALGDCLLRDHEQDREAGYTH
SGPHRANLAFRVRGKPAPDILSRGQLRVLGLAYRLAQVKILKQAGLPLPTILIDDFAAEL
DASARDWWVNELDLLGVQIFAAVTTARQIPATVGGSHFCLAAGQLEKETA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggaggcactgcatatccagtctgtgcgttgcatagaaaccttggatctgaaa
acggaccgccagtggaactggctgataggcgccaacggcgcgggcaagagctcggtgctg
gaagccatccacgtgcttggtacggggcagacctggcgacatgggtcccgccatgtcctg
cgggagggggacgacgcctatctggtcagtgcgcatctgtccggtcatttcctcgccctg
cgccggcgtggcgaagaacgagaaatacgctatgatggggagccgctcggttctgcctgg
ctactgctggatattttgcctctgcaaagcctgcacgaggacaacagccactttgtctcg
gggacggcggagggccgccggcgcgtactggactggggcatttattacgcagaccggtat
tacggcacggtatttcgccaataccgacgggcgttgcagcaacgcaatgcctggctgaaa
agcgatcatggccgacaaccctgggacgatggtgtcatcgtcgccggcgaagacatccag
cagcggcggcaggcccatctcgccgctgtgcagctcgaagtcgtgaccctctgggaacgc
tggtccggatcattgtccgggctcagtctgcatctgcacagcggttggaaggaaggcatg
gcgctgggcgactgcctgctgcgggatcacgaacaggatcgcgaagcgggctatacccac
agcggcccgcatcgcgccaatctggcattccgggtacgcggcaaaccggcaccggatatt
ctttcgcggggccagttgcgggtattgggtctggcctatcgtctggcgcaggtgaaaatc
ctgaagcaggccgggttgcccctgccgaccatactgatcgacgatttcgcggcggagctg
gacgcttcggcacgggattggtgggtcaacgaactcgatctgctgggtgtgcagatcttt
gctgcggtcaccaccgcccggcagattccggcgacggtgggcggcagtcatttttgtctg
gcagcaggccagcttgagaaggaaacggcatga
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