Acidithiobacillus ferrooxidans ATCC 23270: AFE_0178
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Entry
AFE_0178 CDS
T00810
Symbol
xth-1
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFE_0178 (xth-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_0178 (xth-1)
Enzymes [BR:
afr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AFE_0178 (xth-1)
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AFE_0178 (xth-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ACK80177
UniProt:
B7J3S4
LinkDB
All DBs
Position
156035..156808
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AA seq
257 aa
AA seq
DB search
MKIATWNVNSLKVRLPQVLEWLGSEQPDVLCLQETKLADARFPVAELADAGYRALYHGQP
TYNGVAILSRTSPSDVRCDWPDGGDGQARLCAASFGDLRVVNVYVPNGQALDSDKYPYKL
QWLERLRGLIAGELQGWPQLLLVGDFNIAPDTRDVYDAAEWGEGILCSAPERAALGALLE
LGLHDSYRKMHPDARAWSWWDYRAAAFRRNQGLRIDLILASSPVLSRTREVVIDRAARAA
ERPSDHAPVCITLESSA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattgcgacctggaacgtcaactccctcaaggtacgcctcccccaggtgttggaa
tggctgggcagcgagcagccggatgtcctttgtctgcaagagaccaagttggccgatgcg
cgtttcccggtggccgagttggcggatgccggttatcgggcgctctatcacggtcaaccg
acgtataatggggttgccatactgagccgcacatcacccagtgacgtccgctgcgactgg
ccggatggcggcgacgggcaggcgcggctgtgcgccgccagcttcggcgacctgcgcgtc
gtcaacgtctatgtgcccaacggccaagccctggacagcgacaagtatccctacaagttg
caatggctggagcgcctgcgcggattgatcgccggagaattgcagggttggccgcaactg
ctgctggtgggcgacttcaatatcgcccccgatacccgtgacgtttacgacgctgcagag
tggggggagggcatcctctgctcggcgccggagcgggcggcgttgggtgccctgttggaa
ctcgggctgcacgacagctaccgcaagatgcatcccgacgcgcgggcgtggagctggtgg
gattaccgcgcagcggcgtttcggcgcaatcagggcctgcgcatcgatctgattctggct
tcatcccccgttctctcgcgcacgcgggaggtggtcatcgaccgtgccgcccgggcggcg
gagcgtccctcggatcacgcacccgtctgcatcacgctggagagcagcgcgtga
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