Acidithiobacillus ferrooxidans ATCC 23270: AFE_0372
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Entry
AFE_0372 CDS
T00810
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afr03016
]
AFE_0372 (truD)
Enzymes [BR:
afr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AFE_0372 (truD)
Transfer RNA biogenesis [BR:
afr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFE_0372 (truD)
Prokaryotic type
AFE_0372 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ACK80304
UniProt:
B7J4C2
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All DBs
Position
321370..322458
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AA seq
362 aa
AA seq
DB search
MSESLPRIYPAESGLLGAEMRQSPEDFQVTELLPFAPSGLGAHHWLVVEKRGLNTQDVAN
RLARCAGVAVRDVGFAGLKDRQAVTRQSFTVPATAGSNPDWGSLEDDSLHLLQVGRHDRK
LRRGVLRGNHFQLTLRATTGAHSLWDARLQILRKRGFPNYFGAQRFGHRNLQEAARLLSG
QPMRVDRHRRGLLWSAARSALFNLVLAERVRQANWTEILPGEVVQLAGSHSIFLAEDDDL
ADLQARATDWDLHPTGPLPGRGGLAPTLVAAALETSALGAGPVIAGTTDDGLHWARRLAE
QGLDAARRPLRARPENLSGRWEDAQTLILSFFLPAGVFATSCVEGLLGREMAEAQSLDLC
VD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaagtctgccgcgcatctatcccgcagagagcggtctgcttggcgccgaaatg
aggcagtctccagaagactttcaggtcacggaactgctgccttttgccccatccggtttg
ggcgcccatcactggctggtagtggagaagcgcggcctcaatactcaggatgtggccaat
cgtctggcgcgttgtgccggggtggcggtccgggatgtgggttttgccggtctcaaggat
cgtcaagccgttacccggcagagttttacggtgccggccacggcgggtagcaacccggat
tggggcagtctggaagacgacagtctgcaccttctacaggtcggccgccatgaccgtaaa
ttgcgtcggggcgtgttacgtggcaaccactttcaactcaccttgcgcgccaccacggga
gcacacagtctctgggacgcccgcctgcaaattctccggaaacgaggattccccaactat
ttcggtgcccagcgcttcgggcaccgaaatttgcaagaggccgcgcgactgttatccgga
cagccgatgcgagtagaccgccatcggcgcggcctgctctggtccgcggcccgctccgcc
ctgttcaatctggtcctcgccgagcgggtgcggcaagccaactggacggagattctgccg
ggtgaagtcgtgcaactggcgggctcgcacagcatttttctggcggaggacgatgatctc
gcggatttgcaggcgcgcgccaccgactgggacctgcaccccaccggccctttgccgggt
cgtggcgggttggcgccgaccctggttgccgccgcgctggagacctcggccctgggcgcg
gggcccgtcatcgccggtacgacagacgatggcctccattgggcacgtcgtcttgcagaa
caagggctggatgccgcgcggcgccccttgcgcgcgcgtccggaaaacctcagcggtcgc
tgggaggatgcacagactctgattctgagttttttcctccctgcgggcgtattcgcgacg
agttgtgtggaaggccttttggggagggaaatggcggaagcgcaaagccttgacctttgt
gttgactag
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