Acidithiobacillus ferrooxidans ATCC 23270: AFE_0447
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Entry
AFE_0447 CDS
T00810
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr02020
Two-component system
afr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AFE_0447
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFE_0447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
afr02022
]
AFE_0447
Two-component system [BR:
afr02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
AFE_0447
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
HTH_8
AAA_16
HrcA
Zeta_toxin
AAA_22
TP_0454_N
Motif
Other DBs
NCBI-ProteinID:
ACK80813
UniProt:
B7J4J0
LinkDB
All DBs
Position
complement(387060..388445)
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AA seq
461 aa
AA seq
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MPRPAPIILTIDDDPDFLRLLGLWLESEGYHVLASSDPVQGMQTLQTARPDLVITDLRMP
GMDGMAVLETVQALDPDLPVILLTAHGSIPNAVAAMRAQAFGYLSKPFSNEELQELTTAA
LAQRHAGQETRKLRAALRQQAGQSILHRSPAMAALVDELACVANSKASVFLSGESGSGKE
RVARAIHDASPRRDGPFVAVNCGAIPAGLAESELFGHVKGAFTGATQDHTGLIRSASGGT
LFLDEIADLPLTLQVKLLRVLQEGSLRPVGAKTEISVDLRVISATHQDIHALTADGTFRE
DLYYRLHVIPLRVPSLSERAEDIPLLAQHFLDRESQRMNRDILGFSPEALDKLMQRSWPG
NVRELENAVTFAAAVTEKGWVAADAIPDNGRQGGQSAFPPLQDAKAAFERGYLENLLRAT
DGNISRAARIAGRHRTDLYKLMRKHSLAPQLFKNPEDRDEE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaccagctcccatcatcctgaccatcgacgatgatcccgactttctgcgcctg
ctcggcctctggctggaaagtgagggataccacgtcctggccagcagtgatcccgtgcag
ggcatgcagacgttgcagacggccagaccggatctggtcatcaccgatctgcgcatgccc
ggcatggatggaatggccgtgctggagacggtgcaggccctcgatcccgacctccccgtt
atcctcctcaccgcccacggcagcatccccaacgccgtggcagccatgcgtgcccaggct
ttcggatatctgagcaaacccttcagcaatgaagagctccaggagttgaccaccgccgcc
ctggcgcagcgccacgccgggcaggaaacccgcaagctccgggcggcgttgcggcaacag
gccgggcagagcatcctccatcgtagccccgccatggcggcgctggtggatgagctggcg
tgcgttgccaactcgaaagccagcgttttcctttccggagaaagcggatccggcaaagaa
cgggtcgctcgtgccatccacgacgccagcccacgccgtgacggcccgttcgttgcggtc
aattgcggtgccatccccgccgggctggcggagagcgaactcttcggccatgtcaagggc
gccttcaccggcgccacccaggatcacaccggattgatccgcagcgccagcggcggcact
ctgttcctcgacgaaatcgccgacctgcctctcactctgcaggtcaaattgctccgcgtc
cttcaggaaggttccttgcgccccgtcggcgccaaaacggaaatttccgtcgacctgcgg
gtcatcagtgccacccatcaggacattcacgccctcaccgccgacggcaccttccgcgag
gatctttactatcgcctgcatgtcatcccgctgcgggtccccagcctgagcgaaagggcg
gaagacatcccgctgctggcccagcactttctggaccgcgagagtcagcgcatgaaccgg
gatatcctgggtttcagtcccgaggccctcgacaagctgatgcaacgatcctggcccggc
aacgtccgggaattggagaatgccgtcacctttgccgcggccgtcaccgaaaaaggctgg
gtcgccgccgacgccatccctgacaacggccgccagggtggccagagcgcctttcctccc
ctgcaggacgccaaggcggcctttgagcgcggctacctggaaaacctgctacgcgcgacg
gatggcaacatctcccgtgccgcacgcattgccggccgacaccggacggatctttacaag
ctgatgcgtaagcacagtctggctccgcaacttttcaagaatcccgaggaccgggatgag
gaatag
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